CN185674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_ARATH (Homogentisate 1,2-dioxygenase OS=Arabidopsis thaliana GN=HGO PE=2 SV=2) HSP 1 Score: 339.732 bits (870), Expect = 8.450e-93 Identity = 157/200 (78.50%), Postives = 175/200 (87.50%), Query Frame = 1 Query: 85 EDFSDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYTTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 ++ +L Y+SGFGN FSSEAI GALP QNSPL+CP+GLYAEQISGTSFTSPRKLNQRSWLYR+KPS THEPFKPRVPAH KLVSEFD SNS T PTQLRW+P DIPDS DF+DGL+TICGAGSSFLRHG+AIHMY AN M + AFCNADGDFL+VPQ GRLWI TECG+L V+PGEIAV+PQGFRF++ LPDG SRG Sbjct: 6 KELEELKYQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPSVTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSFLRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGFRFSIDLPDGKSRG 205
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_ORYSJ (Homogentisate 1,2-dioxygenase OS=Oryza sativa subsp. japonica GN=HGO PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 8.470e-85 Identity = 147/197 (74.62%), Postives = 164/197 (83.25%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSYT--TPTQLRWKPVDIPDS--PTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SG GNS SSEA+ G LPRGQNSPLVCP GLYAEQ+SGT FT+PR N R+WLYRIKPS THEPF PR PAH +L+ +FD++ + T TPTQLRW+P D+P P DFIDGLYT+CGAGSSFLRHGYAIHMY ANKSMD CAFCNADGDFL+VPQ+G+L I TECGKL V PGEI V+PQGFRFAV LPDGPSRG Sbjct: 24 YLSGLGNSLSSEAVAGTLPRGQNSPLVCPLGLYAEQLSGTPFTAPRARNLRTWLYRIKPSVTHEPFHPRRPAHPRLIGDFDRTTTDTVATPTQLRWRPADVPPHHPPLDFIDGLYTVCGAGSSFLRHGYAIHMYAANKSMDGCAFCNADGDFLIVPQQGKLLITTECGKLLVPPGEIVVIPQGFRFAVDLPDGPSRG 220
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURCJ (Homogentisate 1,2-dioxygenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=hmgA PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.900e-60 Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGDARG 206
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURCH (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain HI2424) GN=hmgA PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.481e-60 Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGNARG 206
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURCA (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain AU 1054) GN=hmgA PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.481e-60 Identity = 114/195 (58.46%), Postives = 147/195 (75.38%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGNARG 206
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURS3 (Homogentisate 1,2-dioxygenase OS=Burkholderia sp. (strain 383) GN=hmgA PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.233e-60 Identity = 112/199 (56.28%), Postives = 149/199 (74.87%), Query Frame = 1 Query: 94 SDLNYESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 ++ Y+SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P +LVSEF S T P QLRW P+ +P PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G++EV P EIAV+P+G RF+V+LPDG +RG Sbjct: 9 ANAGYQSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGPQ-RLVSEFGDSADVPPTPPDQLRWDPLPMPVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRVEVEPFEIAVIPRGVRFSVTLPDGDARG 206
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURVG (Homogentisate 1,2-dioxygenase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hmgA PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.220e-60 Identity = 111/195 (56.92%), Postives = 147/195 (75.38%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGFGN F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+R+WLYRI+P+A H PF+P +LV+EF S T P QLRW P+ +P PTDF++GL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 13 YLSGFGNEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRAWLYRIRPAAVHRPFEP-FTGRQRLVAEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPAEIAVIPRGVRFAVALPDGDARG 206
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURA4 (Homogentisate 1,2-dioxygenase OS=Burkholderia ambifaria (strain MC40-6) GN=hmgA PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.608e-59 Identity = 112/195 (57.44%), Postives = 147/195 (75.38%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P V +LVSEF S T P QLRW P+ +P PTDF++GL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF+V+LPDG +RG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEP-VTGPQRLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFSVALPDGDARG 206
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURCC (Homogentisate 1,2-dioxygenase OS=Burkholderia cenocepacia (strain MC0-3) GN=hmgA PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.744e-59 Identity = 113/195 (57.95%), Postives = 146/195 (74.87%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVSEF S T P QLRW P+ + PTDF+DGL T+ G GS+ +G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RFAV+LPDG +RG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPYAGAQ-RLVSEFGDSADVPPTPPNQLRWDPLPMLVEPTDFVDGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFAVALPDGDARG 206
BLAST of CN185674 vs. ExPASy Swiss-Prot
Match: HGD_BURM1 (Homogentisate 1,2-dioxygenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=hmgA PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.680e-59 Identity = 111/195 (56.92%), Postives = 145/195 (74.36%), Query Frame = 1 Query: 106 YESGFGNSFSSEAIDGALPRGQNSPLVCPFGLYAEQISGTSFTSPRKLNQRSWLYRIKPSATHEPFKPRVPAHGKLVSEFDKSNSY--TTPTQLRWKPVDIPDSPTDFIDGLYTICGAGSSFLRHGYAIHMYTANKSMDNCAFCNADGDFLVVPQKGRLWIATECGKLEVSPGEIAVLPQGFRFAVSLPDGPSRG 684 Y SGF N F++EA+ GALP G+NSP P+GLYAEQ+SGT+FT+PR N+RSWLYRI+P+A H PF+P A +LVS+F S T P QLRW P+ +P PTDF++GL T+ G GS+ G AIH+Y AN+SM + F +ADG+ L+VPQ+GRL+IATE G+L+V P EIAV+P+G RF V+LPDG +RG Sbjct: 13 YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPFAGAQ-RLVSDFADSADVPPTPPNQLRWNPLPMPSEPTDFVEGLVTMAGNGSAAAMSGCAIHLYAANRSMRDRFFYSADGELLIVPQQGRLFIATELGRLDVEPFEIAVIPRGVRFTVALPDGDARG 206 The following BLAST results are available for this feature:
BLAST of CN185674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185674 ID=CN185674; Name=CN185674; organism=Citrus sinensis; type=EST; length=685bpback to top |