CN185624

Overview
NameCN185624
Unique NameCN185624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6417 contig Csv1_Contig6417:474..1312. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185624 vs. ExPASy Swiss-Prot
Match: YQJG_ECOLI (Uncharacterized protein yqjG OS=Escherichia coli (strain K12) GN=yqjG PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 7.071e-61
Identity = 110/197 (55.84%), Postives = 144/197 (73.10%), Query Frame = -3
Query:  247 GKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILGKQRYICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLREYPNLFNYTKDIYQIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGPDIDYSSPHDRE 837
            G+ TVPVLWDKK  TIV+NESAEIIRMFNT F+ +   A  D +P   + +ID  N WIY+ +NNGVY+ GFAT Q  YDEAV +V+E+L + E+ILG+ RY+ GN+LTEADIRL+ TL+RFD VY  HFKC+K  + +Y NL+ + +DIYQ+P ++ TVN  HI+ HY+ SH +INP GII +GP  D   PH R+
Sbjct:  129 GRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAG-DYYPPALQTKIDELNGWIYDTVNNGVYKAGFATSQEAYDEAVAKVFESLARLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKHRISDYLNLYGFLRDIYQMPGIAETVNFDHIRNHYFRSHKTINPTGIISIGPWQDLDEPHGRD 324          
BLAST of CN185624 vs. ExPASy Swiss-Prot
Match: GTO2_SCHPO (Glutathione S-transferase omega-like 2 OS=Schizosaccharomyces pombe GN=gto2 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.997e-47
Identity = 94/192 (48.96%), Postives = 130/192 (67.71%), Query Frame = -3
Query:  280 KFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENAS---LDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEIL--GKQRYICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLR-EYPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGP 834
            +FTVPVLWD K  TIVNNESAEIIRMFN  FN++ E+     +DL+PS  R +ID  N++ Y+ +NNGVY+ GFAT    Y++ V+ V++ LD+ E++L   K  ++ G+ LTE D+RL+ T++RFD VY  HFKCN   +R  YP++  + K +Y + P+   T + +HIK HY  SH  INP GI PLGP
Sbjct:  115 RFTVPVLWDSKYNTIVNNESAEIIRMFNDAFNEVIEDEEKRVVDLYPSSLRTKIDELNDYFYDTVNNGVYKTGFATTAEAYEKNVRVVFQGLDRLEQVLKESKGPFLLGDHLTETDVRLYTTIVRFDPVYVQHFKCNIGTIRHNYPHINQWLKRLYWKHPAFHETTDFKHIKCHYTQSHTQINPLGITPLGP 306          
BLAST of CN185624 vs. ExPASy Swiss-Prot
Match: GTO2_YEAST (Glutathione S-transferase omega-like 2 OS=Saccharomyces cerevisiae GN=ECM4 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.128e-41
Identity = 97/213 (45.54%), Postives = 126/213 (59.15%), Query Frame = -3
Query:  271 KFTVPVLWDKKLKTIVNNESAEIIRMFNT----EFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILG------KQRY-------------ICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGPDID 834
            +FTVPVLWD + +TIVNNES+EIIR+ N+    EF D  ++   DL P+  + QID  N W+Y+ INNGVY+ GFA K   Y+  V  V+E LDK E+IL       K +Y               G++LTEADIRL+ T+IRFD VY  HFKCN   +R  YP +  + +++Y    +   T +  HIK HY  SH  INP GI PLGP  D
Sbjct:  155 RFTVPVLWDLETQTIVNNESSEIIRILNSSAFDEFVD-DDHKKTDLVPAQLKTQIDDFNSWVYDSINNGVYKTGFAEKAEVYESEVNNVFEHLDKVEKILSDKYSKLKAKYGEEDRQKILGEFFTVGDQLTEADIRLYTTVIRFDPVYVQHFKCNFTSIRAGYPFIHLWVRNLYWNYDAFRYTTDFDHIKLHYTRSHTRINPLGITPLGPKPD 366          
BLAST of CN185624 vs. ExPASy Swiss-Prot
Match: GTO3_YEAST (Glutathione S-transferase omega-like 3 OS=Saccharomyces cerevisiae GN=GTO3 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.103e-35
Identity = 88/217 (40.55%), Postives = 120/217 (55.30%), Query Frame = -3
Query:  259 GKFTVPVLWDKKLKTIVNNESAEIIRMFNTE-FNDIA--ENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEILGKQ------------------RYIC-GNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLR-EYPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYGSHPSINPYGIIPLGPDIDYSSP 837
            G+FTVPVLWD +  TIVNNES++II + N+  F++    E   + L P     QI   N W+Y+ INNGVY+ GFA     Y+  V  +++ LDK E +L K+                  RY   G+ LTEAD+RL+ T++RFD VY  HFKCN   +R +Y  +  + K+IY +  +   T +  HIK  Y  S P +NP GI PLGP  D   P
Sbjct:  150 GRFTVPVLWDLETCTIVNNESSDIIGIMNSAAFDEFVGEEYRQVRLVPRSLEAQITEFNSWVYDKINNGVYKAGFAECAEVYEREVTSLFQYLDKLENLLDKKYTDLEAEYGKNNKDKILDRYFAIGDTLTEADVRLYPTIVRFDVVYHQHFKCNLATIRDDYSRIHTWLKNIYWRHEAFQRTTDFTHIKLGYTRSQPRVNPIGITPLGPKPDIRPP 366          
BLAST of CN185624 vs. ExPASy Swiss-Prot
Match: GTO1_YEAST (Glutathione S-transferase omega-like 1 OS=Saccharomyces cerevisiae GN=GTO1 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 9.623e-34
Identity = 90/217 (41.47%), Postives = 119/217 (54.84%), Query Frame = -3
Query:  265 KFTVPVLWDKKLKTIVNNESAEIIRMFNT----EFNDIAENASLDLHPSDQRDQIDGTNEWIYNGINNGVYRCGFATKQGPYDEAVKQVYEALDKCEEIL-------------GKQR-----YICGNRLTEADIRLFVTLIRFDEVYAVHFKCNKKLLRE-YPNLFNYTKDIY-QIPSMSSTVNMQHIKRHYYG---SHPSINPYGIIPLGPDIDYS 834
            KFTVPVLWD K + IVNNES +IIR+ N+    EF    E   +DL P D  D+ID   +W++  IN GVY+ G A     Y+  VK ++E L K E +L              KQ+     ++ G RLTEADIRL+ ++IRFD VY  HFKCN K +R+ +P L  +  ++Y        T +  HIK  Y     S   IN +GI+PLGP  D S
Sbjct:  138 KFTVPVLWDSKTRKIVNNESGDIIRILNSGVFDEFIQSEETNVIDLVPHDLIDEIDKNIKWVHPKINLGVYKVGLAENGKIYETEVKTLFENLQKMECVLKENYKRLEEQFSGNKQKILAKYFVLGQRLTEADIRLYPSIIRFDVVYVQHFKCNLKTIRDGFPYLHLWLINLYWNYAEFRFTTDFNHIKLFYIRMEVSRNKINQFGIVPLGPKPDIS 354          
The following BLAST results are available for this feature:
BLAST of CN185624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YQJG_ECOLI7.071e-6155.84Uncharacterized protein yqjG OS=Escherichia coli (... [more]
GTO2_SCHPO1.997e-4748.96Glutathione S-transferase omega-like 2 OS=Schizosa... [more]
GTO2_YEAST8.128e-4145.54Glutathione S-transferase omega-like 2 OS=Saccharo... [more]
GTO3_YEAST5.103e-3540.55Glutathione S-transferase omega-like 3 OS=Saccharo... [more]
GTO1_YEAST9.623e-3441.47Glutathione S-transferase omega-like 1 OS=Saccharo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001K01_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001K01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185624 ID=CN185624; Name=CN185624; organism=Citrus sinensis; type=EST; length=839bp
GGGGGGGGGGGGGGGCGGAGGGCGGGCCCCCCGTGTGTTTTCTTTAGTAA
TCCAGTAAGCCTCCAGTCCCTGAAATTTATTTACCCTTTTTCTCCAGAGA
GAGCATTCACAATAAATTTATTTAATAACATCACACACAGAATATATACA
CATCTCGACTGACAGTCTAAACAGAAAATGCTTTTATAAACAATGACCAA
GCTCATCTTAGGCACTGTAGAAATATGGAAATTATGCAGAAAATTTTTCT
CTGTCATGGGGTGAAGAATAATCGATATCAGGGCCAAGAGGGATGATCCC
ATATGGATTGATAGAAGGATGGCTCCCATAGTAATGCCGCTTGATGTGTT
GCATATTCACAGTGCTAGACATGCTGGGAATCTGATATATGTCTTTGGTG
TAGTTGAACAGATTTGGATATTCTCGTAATAGTTTCTTGTTGCACTTGAA
GTGAACTGCATAAACCTCATCAAATCTTATAAGCGTGACAAACAACCGAA
TATCTGCTTCAGTCAGCCTGTTTCCACAAATGTATCGTTGCTTGCCAAGT
ATCTCTTCACATTTGTCCAATGCTTCGTACACCTGCTTAACAGCTTCATC
ATAAGGTCCTTGCTTTGTTGCAAACCCACATCGATAAACACCATTGTTTA
TCCCATTGTATATCCATTCATTAGTCCCATCAATTTGATCTCGCTGATCA
GATGGATGTAGATCCAGAGAAGCATTTTCAGCTATATCATTGAATTCCGT
ATTAAACATGCGGATTATCTCCGCACTCTCATTATTAACAATCGTCTTCA
ACTTCTTATCCCACAGTACGGGGACAGTGAACTTCCCTG
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