CN185608

Overview
NameCN185608
Unique NameCN185608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4881 contig Csv1_Contig4881:58..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: ATB15_ARATH (Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana GN=ATHB-15 PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.958e-87
Identity = 154/174 (88.51%), Postives = 167/174 (95.98%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 715
            SVQRVALALSPS+ISSQ GLRTPLGTPEA TLARWIC SYR Y+GV+LLKS+S+G+ESILKNLWHHTDA++CCS+KALPVFTFANQAGLDMLETTLVALQDI+LEKIFDD+GRK L +EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE AHCICF+FINWSFV
Sbjct:  663 SVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNESILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCSEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENAHCICFVFINWSFV 836          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: ATHB8_ARATH (Homeobox-leucine zipper protein ATHB-8 OS=Arabidopsis thaliana GN=ATHB-8 PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.558e-68
Identity = 130/176 (73.86%), Postives = 148/176 (84.09%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKAL-PVFTFANQAGLDMLETTLVALQDITLEKIFDDH-GRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 715
            SVQRVALALSPS+    +GLR P  +PEA TLARWI HSYRCYLGVDLLK        +LK+LWHH DAVMCCSLKAL PVFTFANQAGLDMLETTLVALQDITL+KIFD++ G+K L +EFPQIMQQGF C+ GGIC+SSMGR V+YE+AV WKVLN++E  HCICFMF+NWSF+
Sbjct:  662 SVQRVALALSPSS-HQLSGLRPPPASPEAHTLARWISHSYRCYLGVDLLKPHGT---DLLKSLWHHPDAVMCCSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNNGKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLNDDEDPHCICFMFLNWSFI 833          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSJ (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. japonica GN=HOX32 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 2.939e-67
Identity = 118/174 (67.82%), Postives = 146/174 (83.91%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 715
            SVQRVA+A++PS +  Q   + P G+PEA TLARWI  SYR + G DLL++ S+ ++S LK +W H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL  EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct:  686 SVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: HOX32_ORYSI (Homeobox-leucine zipper protein HOX32 OS=Oryza sativa subsp. indica GN=HOX32 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.013e-67
Identity = 118/174 (67.82%), Postives = 145/174 (83.33%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 715
            SVQRVA+A++PS +  Q   + P G+PEA TLARWI  SYR + G DLL++ S+  +S LK +W H+D++MCCSLKA PVFTFANQAGLDMLETTL+ALQDI+LEKI DD GRKAL  EFP+IMQQGFA L GG+C+SSMGRPVSYE+AVAWKVL++++T HC+ FMF+NWSFV
Sbjct:  686 SVQRVAMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQSMDSSLKAMWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSJ (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. japonica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 5.025e-59
Identity = 112/182 (61.54%), Postives = 143/182 (78.57%), Query Frame = -3
Query:  194 SVQRVALALSPSNI-----SSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKS--SSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLN-EEETAHCICFMFINWSFV 715
            SVQR+A+ALS S +      + A   +P+ TPEA TL RWIC SYR + G +L+KS  ++  +ESILK +WHH  A++CCSLKA+PVFTFANQ+GLDMLETTLVALQD+TLEK+FDD GRK L  E P IM+QG AC++GG+C+SS+GR  SYE+AVAWKV++ +   AHCICFMFINW+F+
Sbjct:  688 SVQRIAVALSSSRLVPPGAGAAAAQLSPV-TPEAATLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSLKAMPVFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSSVGRAASYEKAVAWKVVDGDGGGAHCICFMFINWTFL 868          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: REV_ARATH (Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana GN=REV PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58
Identity = 114/179 (63.69%), Postives = 137/179 (76.54%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSE-SILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEE----TAHCICFMFINWSFV 715
            SVQRVA+A+SPS IS   G +   G+PEA+TLA+WI  SY  +LG +LL   S GS+ S+LK LW H DA++CCSLK  PVF FANQAGLDMLETTLVALQDITLEKIFD+ GRKA+ ++F ++MQQGFACL  GIC+S+MGR VSYE+AVAWKV    E      HC+ F F+NWSFV
Sbjct:  664 SVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDSVLKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSDFAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: HOX9_ORYSJ (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. japonica GN=HOX9 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58
Identity = 103/174 (59.20%), Postives = 136/174 (78.16%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 715
            SVQRV++A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW + DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+QG+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct:  667 SVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: HOX9_ORYSI (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica GN=HOX9 PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58
Identity = 103/174 (59.20%), Postives = 136/174 (78.16%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 715
            SVQRV++A+SPS     AG +   G PEA TLARWIC SY+ +LGV+LL+ + +  E++LK LW + DA++CCS K  PVFTFAN+ GL+MLET+LVALQD++L+KIFD+ GRKAL+ E P++M+QG+  L GG+CLS MGR VS+E+AVAWKVL E+   HC+ F F+NWSFV
Sbjct:  667 SVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: HOX33_ORYSJ (Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. japonica GN=HOX33 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58
Identity = 105/174 (60.34%), Postives = 135/174 (77.59%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 715
            SVQRVA+A++PS +  Q G++ P  +PEALTLA WI  SYR + G D+  S +E ++S L  LW H+DA++CCSLK  P+FTFAN AGLD+LETTLV LQDI+LE I DD GRKAL +EFP+IMQQGF  L GG+C SSMGR  SYE+AVAWKVL++++  HC+ FM +NW+F+
Sbjct:  682 SVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855          
BLAST of CN185608 vs. ExPASy Swiss-Prot
Match: HOX33_ORYSI (Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. indica GN=HOX33 PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58
Identity = 105/174 (60.34%), Postives = 135/174 (77.59%), Query Frame = -3
Query:  194 SVQRVALALSPSNISSQAGLRTPLGTPEALTLARWICHSYRCYLGVDLLKSSSEGSESILKNLWHHTDAVMCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDHGRKALFAEFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV 715
            SVQRVA+A++PS +  Q G++ P  +PEALTLA WI  SYR + G D+  S +E ++S L  LW H+DA++CCSLK  P+FTFAN AGLD+LETTLV LQDI+LE I DD GRKAL +EFP+IMQQGF  L GG+C SSMGR  SYE+AVAWKVL++++  HC+ FM +NW+F+
Sbjct:  682 SVQRVAVAIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLALLWKHSDAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQGFTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855          
The following BLAST results are available for this feature:
BLAST of CN185608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ATB15_ARATH1.958e-8788.51Homeobox-leucine zipper protein ATHB-15 OS=Arabido... [more]
ATHB8_ARATH1.558e-6873.86Homeobox-leucine zipper protein ATHB-8 OS=Arabidop... [more]
HOX32_ORYSJ2.939e-6767.82Homeobox-leucine zipper protein HOX32 OS=Oryza sat... [more]
HOX32_ORYSI5.013e-6767.82Homeobox-leucine zipper protein HOX32 OS=Oryza sat... [more]
HOX29_ORYSJ5.025e-5961.54Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]
REV_ARATH1.909e-5863.69Homeobox-leucine zipper protein REVOLUTA OS=Arabid... [more]
HOX9_ORYSJ1.909e-5859.20Homeobox-leucine zipper protein HOX9 OS=Oryza sati... [more]
HOX9_ORYSI1.909e-5859.20Homeobox-leucine zipper protein HOX9 OS=Oryza sati... [more]
HOX33_ORYSJ1.909e-5860.34Homeobox-leucine zipper protein HOX33 OS=Oryza sat... [more]
HOX33_ORYSI1.909e-5860.34Homeobox-leucine zipper protein HOX33 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J16_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185608 ID=CN185608; Name=CN185608; organism=Citrus sinensis; type=EST; length=717bp
ATGGAAGTTTCACACATCTATTGACTGATTATAGGCTAGTAGCATAACTT
CCAAGCAATACAAACGCAAAGCAGTTTAGAGAGAAGTAACATAGGCCTAA
CAACCTTATCTGTCCTAAGTATCCAAGGTTTCCATGGCCAAAAGATAATA
CAATCCAACAAAATACAGACCTTCGCTGGTCCAAAGTATTTTACACAAAT
GACCAGTTGATGAACATAAAGCAGATGCAATGAGCAGTCTCTTCTTCATT
AAGTACCTTCCAAGCCACAGCCCTCTCGTAAGAAACCGGTCTGCCCATGC
TTGACAAACAGATGCCACCTTGAAGACAAGCAAAGCCCTGTTGCATTATC
TGGGGGAACTCCGCGAAGAGAGCCTTCCGCCCATGATCATCAAATATCTT
CTCCAAGGTTATGTCTTGCAGTGCAACCAAGGTCGTCTCAAGCATATCAA
GTCCCGCTTGGTTTGCAAAAGTGAAAACAGGCAATGCCTTTAGTGAGCAG
CACATGACAGCATCTGTGTGATGCCAAAGGTTTTTGAGAATGGATTCACT
TCCTTCACTGCTGGATTTAAGCAGATCCACACCCAAGTAACACCTGTAAC
TGTGACAGATCCAACGAGCAAGTGTTAGTGCTTCTGGAGTACCTAATGGT
GTACGGAGACCAGCTTGTGAACTTATATTAGAAGGAGATAGGGCTAATGC
CACCCTCTGAACAGATG
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