DC887906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM11_CUCSA (Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 5.801e-55 Identity = 104/118 (88.14%), Postives = 110/118 (93.22%), Query Frame = -3 Query: 270 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 623 EESKQF AWRDSLETVPTIKKLRAYAERIR AEL+KCLSKMGDDI KKTRRAVDDLSRGIVNKLLHGPMQHLRCDG DSRTL ETLENMHALNRMF LET+ ++ EQK+RAK+EQNQK Sbjct: 435 EESKQFEAWRDSLETVPTIKKLRAYAERIRTAELEKCLSKMGDDIPKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEIAVLEQKIRAKVEQNQK 552
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM11_ARATH (Glutamyl-tRNA reductase 1, chloroplastic OS=Arabidopsis thaliana GN=HEMA1 PE=2 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 3.642e-49 Identity = 96/118 (81.36%), Postives = 105/118 (88.98%), Query Frame = -3 Query: 270 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 623 EES QF AWRDSLETVPTIKKLRAYAERIRVAEL+KC+SKMGDDI+KKT RAVDDLSRGIVN+ LHGPMQHLRCDG DSRTL ETLENMHALNRM+GLE D + E+K++A EQ QK Sbjct: 428 EESTQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCMSKMGDDINKKTTRAVDDLSRGIVNRFLHGPMQHLRCDGSDSRTLSETLENMHALNRMYGLEKD--ILEEKLKAMAEQQQK 543
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM12_CUCSA (Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumis sativus GN=HEMA2 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.692e-46 Identity = 88/118 (74.58%), Postives = 101/118 (85.59%), Query Frame = -3 Query: 270 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQK 623 EE +F AWRDSLETVPTIKK RAY ERIR AELDKCLSKMG+DI KK + A++DLS GI NKLLHGP+QHLRCDG DSRTLDE L+NMHA+NRMF LETD S+ E+K+RAK+E+ QK Sbjct: 425 EEINKFEAWRDSLETVPTIKKFRAYVERIRAAELDKCLSKMGEDIPKKKKVAINDLSLGIANKLLHGPIQHLRCDGNDSRTLDEILQNMHAINRMFDLETDLSVLEEKIRAKVERGQK 542
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM12_HORVU (Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.432e-45 Identity = 84/118 (71.19%), Postives = 107/118 (90.68%), Query Frame = -3 Query: 273 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 623 +E K+F AWRDSLETVPTIKKLR+YA+RIR +ELDKCL K+G+D ++KKTRR++++LS GIVNKLLHGP+QHLRCDG DSRTLDETL+NMHALNRMF L+T+ ++ EQK++AK+E+ Q Sbjct: 347 QELKRFEAWRDSLETVPTIKKLRSYADRIRASELDKCLQKIGEDNLNKKTRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLDNMHALNRMFNLDTEKAVLEQKIKAKVEKTQ 464
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSJ (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.442e-45 Identity = 83/118 (70.34%), Postives = 107/118 (90.68%), Query Frame = -3 Query: 273 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 623 +E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDG DSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E++Q Sbjct: 419 QELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDALTKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAKVEKSQ 536
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSI (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 5.442e-45 Identity = 83/118 (70.34%), Postives = 107/118 (90.68%), Query Frame = -3 Query: 273 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 623 +E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDG DSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E++Q Sbjct: 419 QELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDSLTKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAIIEQKIKAKVEKSQ 536
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM11_HORVU (Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 9.283e-45 Identity = 83/118 (70.34%), Postives = 106/118 (89.83%), Query Frame = -3 Query: 273 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 623 +E K+F AWRDSLETVPTIKKLR+YA+RIR +EL+KCL K+G+D ++KK RR++++LS GIVNKLLHGP+QHLRCDG DSRTLDETLENMHALNRMF L+T+ ++ EQK++AK+E+ Q Sbjct: 409 QELKRFEAWRDSLETVPTIKKLRSYADRIRASELEKCLQKIGEDNLNKKMRRSIEELSTGIVNKLLHGPLQHLRCDGSDSRTLDETLENMHALNRMFSLDTEKAVLEQKIKAKVEKTQ 526
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM13_HORVU (Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 4.607e-44 Identity = 80/118 (67.80%), Postives = 105/118 (88.98%), Query Frame = -3 Query: 273 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDD-ISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQNQ 623 EE K+F AWRDS+ETVPTIKKLR+YA+R+R +ELDKCL K+G+D ++KK RR+++ LS GIVN+LLHGP+QHLRCDG D+RTLDETLENMHALNRMFGL+T+ ++ EQK++ K+E+ + Sbjct: 415 EELKRFEAWRDSMETVPTIKKLRSYADRVRASELDKCLQKIGEDALTKKMRRSIEQLSTGIVNRLLHGPLQHLRCDGTDNRTLDETLENMHALNRMFGLDTEKAVMEQKIKTKVEKQK 532
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM12_ARATH (Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 3.650e-41 Identity = 82/115 (71.30%), Postives = 95/115 (82.61%), Query Frame = -3 Query: 279 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLETDTSLFEQKVRAKIEQ 623 +ESK F AWRDSLETVPTIKKLR Y ERI AE++K L KMG D++KK R+ VDDL RGIVNKLLHGPMQHLRCDG DSRTL ETL+NM ALNRM+GL D + E+K+RAK+E+ Sbjct: 417 DESKHFEAWRDSLETVPTIKKLRGYTERIIAAEIEKSLPKMGIDMNKKMRKTVDDLIRGIVNKLLHGPMQHLRCDGNDSRTLSETLDNMQALNRMYGL--DAEILEEKIRAKVEK 529
BLAST of DC887906 vs. ExPASy Swiss-Prot
Match: HEM1_SYNS9 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain CC9902) GN=hemA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.270e-17 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = -3 Query: 327 EESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGXDSRTLDETLENMHALNRMFGLE 623 +E++QF W DSLE VPTI +LR+ E IR EL K LS+MG D S + R+ V+ LS+GI+NK+LH P+ LR S+ E + + A+ R+F L+ Sbjct: 336 DEAQQFLDWWDSLEAVPTINQLRSSMETIRTEELQKALSRMGPDFSARERKVVEALSKGIINKILHTPVTKLRA----SQARSERQQALRAVERLFDLD 430 The following BLAST results are available for this feature:
BLAST of DC887906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887906 ID=DC887906; Name=DC887906; organism=Citrus sinensis; type=EST; length=625bpback to top |