DC887905

Overview
NameDC887905
Unique NameDC887905
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.392e-17
Identity = 37/71 (52.11%), Postives = 53/71 (74.65%), Query Frame = -2
Query:  185 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQ 397
            FGIVLWEL T  LP++ +TP+QAA  V +K  RP +P + QP LA L++RCW ++P+ RPDFS I+ +L++
Sbjct:  272 FGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWSENPSKRPDFSNIVAVLEK 342          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.447e-15
Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = -2
Query:  182 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQI 397
            FGI+LWEL TG+LPY  L  +Q A+ V  K LRP IP     +L+ L++ CW QDP  RP F+EI+ +L +I
Sbjct:  844 FGIILWELGTGELPYSGLDSVQLALAVTTKSLRPPIPNAWPYQLSHLIQACWHQDPLKRPSFTEILNLLNEI 915          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: Y9963_DICDI (Probable serine/threonine-protein kinase DDB_G0272254 OS=Dictyostelium discoideum GN=DDB_G0272254 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.761e-12
Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = -2
Query:  191 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEIL 397
            + IVL+ELLTG+ PY+ + P+ A + V  KGLRP +P N  P   +L+  CW +DP  RP F EI   L
Sbjct: 1259 YAIVLYELLTGEEPYQGIPPMNAGILVASKGLRPELPDNCDPNWKKLVVWCWSEDPNKRPSFEEITNYL 1327          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: Y1197_DICDI (Probable serine/threonine-protein kinase DDB_G0288147 OS=Dictyostelium discoideum GN=DDB_G0288147 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.004e-12
Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = -2
Query:  182 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQI 397
            FG+VLWE+ T   PY+ LT ++ A+  VQ G RPTIP      +A L+E CW Q P LRP F+EI+++   +
Sbjct:  783 FGVVLWEMFTQDTPYKNLTRIEQAL-FVQSGGRPTIPPTVPTTIANLIESCWVQTPHLRPTFTEILKVFYSL 853          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: PYK2_DICDI (Dual specificity protein kinase pyk2 OS=Dictyostelium discoideum GN=splB PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.004e-12
Identity = 32/73 (43.84%), Postives = 48/73 (65.75%), Query Frame = -2
Query:  179 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIA 397
            F +V+WE+LTG++P+  L   QA+  V   GLRP IP+   P+L  LL +CW+ DP  RP F+ I+  L++I+
Sbjct: 1041 FSLVVWEILTGEIPFSDLDGSQASAQVAYAGLRPPIPEYCDPELKLLLTQCWEADPNDRPPFTYIVNKLKEIS 1113          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 3.924e-12
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = -2
Query:  179 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIA 397
            +G+VLWE+LT ++P++ L  LQ A  VV+K  R TIP +     AELL +CW+ D   RP F +II IL+ ++
Sbjct:  192 YGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESMS 264          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 3.924e-12
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = -2
Query:  179 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIA 397
            +G+VLWE+LT ++P++ L  LQ A  VV+K  R TIP +     AELL +CW+ D   RP F +II IL+ ++
Sbjct:  192 YGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQCWEADAKKRPSFKQIISILESMS 264          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: M3KSL_DROME (Mitogen-activated protein kinase kinase kinase OS=Drosophila melanogaster GN=slpr PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.693e-12
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = -2
Query:  179 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQIA 397
            +G++LWEL+TG+ PY+   PL  A GV    L   IPK        L++ CWQ DP  RP F EI++ L+ IA
Sbjct:  331 YGVLLWELITGETPYKGFDPLSVAYGVAVNTLTLPIPKTCPETWGALMKSCWQTDPHKRPGFKEILKQLESIA 403          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: M3K10_MOUSE (Mitogen-activated protein kinase kinase kinase 10 OS=Mus musculus GN=Map3k10 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.693e-12
Identity = 33/72 (45.83%), Postives = 41/72 (56.94%), Query Frame = -2
Query:  182 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQI 397
            FG++LWELLTG++PY  +  L  A GV    L   IP       A LLE CW  DP  RPDF  I++ L+ I
Sbjct:  289 FGVLLWELLTGEVPYREIDALAVAYGVAMNKLTLPIPSTCPEPFARLLEECWDPDPHGRPDFGSILKQLEVI 360          
BLAST of DC887905 vs. ExPASy Swiss-Prot
Match: M3K10_HUMAN (Mitogen-activated protein kinase kinase kinase 10 OS=Homo sapiens GN=MAP3K10 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 6.693e-12
Identity = 33/72 (45.83%), Postives = 41/72 (56.94%), Query Frame = -2
Query:  182 FGIVLWELLTGKLPYEYLTPLQAAVGVVQKGLRPTIPKNSQPKLAELLERCWQQDPALRPDFSEIIEILQQI 397
            FG++LWELLTG++PY  +  L  A GV    L   IP       A LLE CW  DP  RPDF  I++ L+ I
Sbjct:  289 FGVLLWELLTGEVPYREIDALAVAYGVAMNKLTLPIPSTCPEPFARLLEECWDPDPHGRPDFGSILKRLEVI 360          
The following BLAST results are available for this feature:
BLAST of DC887905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
HT1_ARATH1.392e-1752.11Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
Y9955_DICDI8.447e-1550.00Probable serine/threonine-protein kinase DDB_G0267... [more]
Y9963_DICDI1.761e-1246.38Probable serine/threonine-protein kinase DDB_G0272... [more]
Y1197_DICDI3.004e-1245.83Probable serine/threonine-protein kinase DDB_G0288... [more]
PYK2_DICDI3.004e-1243.84Dual specificity protein kinase pyk2 OS=Dictyostel... [more]
MLTK_MOUSE3.924e-1245.21Mitogen-activated protein kinase kinase kinase MLT... [more]
MLTK_HUMAN3.924e-1245.21Mitogen-activated protein kinase kinase kinase MLT... [more]
M3KSL_DROME6.693e-1243.84Mitogen-activated protein kinase kinase kinase OS=... [more]
M3K10_MOUSE6.693e-1245.83Mitogen-activated protein kinase kinase kinase 10 ... [more]
M3K10_HUMAN6.693e-1245.83Mitogen-activated protein kinase kinase kinase 10 ... [more]

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Properties
Property NameValue
Genbank descriptionDC887905 EIC Citrus sinensis cDNA clone EIC1090 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887905 ID=DC887905; Name=DC887905; organism=Citrus sinensis; type=EST; length=398bp
GTACAGTGCTGAGAAATAAGAAGCCGGTAGATTCCCTACACAATTAAAGC
TCGTGTCCACGTCATTAACATTAGCATACCTCCTGTCTATTTCAATGGTG
GCCTCTTCTAAGGACTGATAAGAAACCCCCAGATGATTTTTCTTTGCGCC
GCTCCTCATTTTCCTCACCAACCTCCTTAGCAATTTGCTGCAGAATCTCT
ATTATTTCAGAAAAATCAGGTCTTAGAGCTGGATCTTGCTGCCAGCACCT
CTCCAGCAACTCAGCTAGTTTTGGCTGACTGTTTTTGGGAATTGTAGGCC
GTAGACCCTTCTGGACCACCCCAACAGCTGCCTGTAATGGAGTCAAGTAT
TCGTATGGAAGCTTTCCAGTTAGCAACTCCCATAATACAATTCCAAAA
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