DC887901
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS7_ORYSJ (40S ribosomal protein S7 OS=Oryza sativa subsp. japonica GN=RPS7 PE=2 SV=2) HSP 1 Score: 296.59 bits (758), Expect = 7.704e-80 Identity = 144/171 (84.21%), Postives = 160/171 (93.57%), Query Frame = -1 Query: 116 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 628 E+TVAQA FDLEN NQELKSDLKDLYIN A+QMD+ GNRKA+++YVPYRLRKAY+KIH RLVRELEKKFSGKDVVL+ATRRIVRPPKKGSAV RPR+RTLTAVHD +LEDVVYPAEIVGKRVRY LDG KI+KIFLDPKERNNTEYKL++FS VYR+L GKDVVFDYP+T+ Sbjct: 20 EDTVAQAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVVRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGKDVVFDYPMTE 190
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS7_BRAOL (40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.314e-79 Identity = 139/171 (81.29%), Postives = 161/171 (94.15%), Query Frame = -1 Query: 116 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 628 EE VAQA FDLENTNQELKSDLKDLYINQA+ MD++GNRKA+V+YVP+RLRKA+RKIHSRLVRELEKKFSG DV+ +ATRRI+RPPKKGSAVQRPR+RTLT+VH+AMLEDV YPAEIVGKR RYR+DG+KI+K++L+PKERNNTEYKLE+ GVYRKLTGKDVVF+YP+ D Sbjct: 20 EERVAQAFFDLENTNQELKSDLKDLYINQAVSMDIAGNRKAVVIYVPFRLRKAFRKIHSRLVRELEKKFSGNDVIFVATRRIMRPPKKGSAVQRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGKDVVFEYPVAD 190
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS7_AVIMR (40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 4.994e-79 Identity = 141/171 (82.46%), Postives = 164/171 (95.91%), Query Frame = -1 Query: 116 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 628 EE VAQALFD ENTNQE+KSDLKDLYIN A+Q+DVSG +KA+V++VPYRLRK++RKIH RLVRELEKKFSGK+VVLIATRRI+RPPKKGSAVQRPRSRTLTAVHDAMLED+VYPAEIVGKRVRYRLDGSKI+K+FLDPK +N+TE KLE+F+GVYRKL+GKDVVF++P+T+ Sbjct: 20 EENVAQALFDFENTNQEIKSDLKDLYINSALQIDVSGGKKAVVIHVPYRLRKSFRKIHPRLVRELEKKFSGKEVVLIATRRILRPPKKGSAVQRPRSRTLTAVHDAMLEDIVYPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGKDVVFEFPLTE 190
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS71_ARATH (40S ribosomal protein S7-1 OS=Arabidopsis thaliana GN=RPS7A PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 1.898e-78 Identity = 141/173 (81.50%), Postives = 163/173 (94.22%), Query Frame = -1 Query: 113 LEETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 631 L+E VAQA FDLENTNQELKS+LKDLY+N A+Q+D+SG RKAIVV VPYRLRKAYRKIH RLVRELEKKFSGKDV+LIATRRIVRPPKKGSA +RPR+RTLT+VH+A+L+DVV PAEIVGKR RYRLDG+KI+K+FLDPKERNNTEYK+E+FS VY+KLTGKDVVF++PIT+A Sbjct: 19 LDEQVAQAFFDLENTNQELKSELKDLYVNSAVQVDISGGRKAIVVNVPYRLRKAYRKIHVRLVRELEKKFSGKDVILIATRRIVRPPKKGSAAKRPRNRTLTSVHEAILDDVVLPAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGKDVVFEFPITEA 191
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS73_ARATH (40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=2 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 3.237e-78 Identity = 138/169 (81.66%), Postives = 159/169 (94.08%), Query Frame = -1 Query: 122 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPI 628 EE VAQALFDLENTNQELKS+LKDLYINQA+ MD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ + TRRI+RPPKKG+AVQRPR+RTLT+VH+AMLEDV +PAEIVGKR RYRLDGSKI+K+FLD KE+NNTEYKLE+ GVYRKLTGKDVVF+YP+ Sbjct: 20 EEQVAQALFDLENTNQELKSELKDLYINQAVHMDISGNRKAVVIYVPFRLRKAFRKIHPRLVRELEKKFSGKDVIFVTTRRIMRPPKKGAAVQRPRNRTLTSVHEAMLEDVAFPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGKDVVFEYPV 188
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS72_ARATH (40S ribosomal protein S7-2 OS=Arabidopsis thaliana GN=RPS7B PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.237e-78 Identity = 139/172 (80.81%), Postives = 161/172 (93.60%), Query Frame = -1 Query: 113 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 628 EE V QALFDLENTNQELKS+LKDLYINQA+QMD+SGNRKA+V+YVP+RLRKA+RKIH RLVRELEKKFSGKDV+ +ATRRI+RPPKKGSAVQRPR+RTLT+VH+AMLEDV YPAEIVGKR RYRLDG+KI+K+FLD K +N+TEYKLE+ GVYRKLTGKDVVF+YP+ +A Sbjct: 20 EEQVTQALFDLENTNQELKSELKDLYINQAVQMDISGNRKAVVIYVPFRLRKAFRKIHLRLVRELEKKFSGKDVIFVATRRIMRPPKKGSAVQRPRNRTLTSVHEAMLEDVAYPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGKDVVFEYPVIEA 191
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS7_SECCE (40S ribosomal protein S7 OS=Secale cereale GN=RPS7 PE=2 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 9.418e-78 Identity = 140/171 (81.87%), Postives = 159/171 (92.98%), Query Frame = -1 Query: 116 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 628 E+TVAQA FDLEN NQELKSD+KDLYIN A QMDV+GNRKA+V++VPYRLRK +RKIH RLVRELEKKFSGKDVV++ATRRIVRPPKKGSAV RPR+RTLTAVHD +LEDVVYPAEIVGKRVRYRLDGSKIIKIFLDP ERNNTEYKL++F+ VYR+L GKDVV++YP+ + Sbjct: 20 EDTVAQAFFDLENGNQELKSDVKDLYINAAFQMDVAGNRKAVVIHVPYRLRKNFRKIHVRLVRELEKKFSGKDVVIVATRRIVRPPKKGSAVVRPRTRTLTAVHDGLLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGKDVVYEYPVAE 190
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS7_HORVU (40S ribosomal protein S7 OS=Hordeum vulgare GN=RPS7 PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 1.360e-76 Identity = 141/171 (82.46%), Postives = 158/171 (92.40%), Query Frame = -1 Query: 116 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 628 E+TVAQA FDLEN NQELKSDLKDLYIN AIQMDV GNRKA+V++VPYRLRK +RKIH RLVRELE+ SGKDVV +ATRRIVRPPKKGSAVQRPR+RTLTAVHD +LEDVVYPAEIVGKRVRYRLDG+K+IKI+LDPKERNNTEYKLE+FS VYR+L GKDVVF+YP+ + Sbjct: 20 EDTVAQAFFDLENGNQELKSDLKDLYINTAIQMDVVGNRKAVVIHVPYRLRKPFRKIHVRLVRELER-VSGKDVVFVATRRIVRPPKKGSAVQRPRTRTLTAVHDGILEDVVYPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLCGKDVVFEYPVAE 189
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS7_ICTPU (40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.417e-49 Identity = 99/172 (57.56%), Postives = 135/172 (78.49%), Query Frame = -1 Query: 125 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 628 E ++QAL +LE N +LK+ L++L I A +++V G+RKAI+++VP KA++KI RLVRELEKKFSGK VV IA RRI+ P + S + RPRSRTLTAVHDA+LED+VYP+EIVGKR+R +LD S++IK+ LD ++NN E+K+E+F+GVY+KLTGKDVVF++P Sbjct: 20 ESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGGSRKAIIIFVPVPQLKAFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKKLTGKDVVFEFP 190
BLAST of DC887901 vs. ExPASy Swiss-Prot
Match: RS7_XENLA (40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 7.033e-49 Identity = 98/172 (56.98%), Postives = 134/172 (77.91%), Query Frame = -1 Query: 125 EETVAQALFDLENTNQELKSDLKDLYINQAIQMDVSGNRKAIVVYVPYRLRKAYRKIHSRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQ----RPRSRTLTAVHDAMLEDVVYPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 628 E ++QAL +LE N +LK+ L++L I A +++V RKAI+++VP K+++KI RLVRELEKKFSGK VV IA RRI+ P + S + RPRSRTLTAVHDA+LED+VYP+EIVG+R+R +LDGS++IK+ LD ++NN E+K+E+FSGVY+KLTGKDVVF++P Sbjct: 20 ESGISQALLELE-MNSDLKAQLRELNITAAKEIEVGAGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVYPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEFP 190 The following BLAST results are available for this feature:
BLAST of DC887901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887901 ID=DC887901; Name=DC887901; organism=Citrus sinensis; type=EST; length=664bpback to top |