DC887869
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: GAE1_ARATH (UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.416e-40 Identity = 78/92 (84.78%), Postives = 86/92 (93.48%), Query Frame = -3 Query: 310 GRKRSGGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYN 585 G+KR G APYRIFNLGNTSPVTVP LV+ILE+HLKVKAK+N +EMPGNGDVPFTHANISSA+ EFGY+PTTDL+TGLKKFVRWYLSYYGYN Sbjct: 333 GKKR--GAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYYGYN 422
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: GAE4_ARATH (UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.379e-34 Identity = 71/89 (79.78%), Postives = 77/89 (86.52%), Query Frame = -3 Query: 319 GRKRSGGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 585 G+KR GPA R+FNLGNTSPV V LV ILER LKVKAKKN+I+MP NGDVPFTHANIS AQ+E GY+PTTDLQTGLKKFVRWYLSYY Sbjct: 342 GKKR--GPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 428
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: GAE2_ARATH (UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.087e-32 Identity = 70/97 (72.16%), Postives = 82/97 (84.54%), Query Frame = -3 Query: 295 GRKRSGGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRGKRV 585 G+KR G A R+FNLGNTSPV V LV+ILER LKVKAK+N++++P NGDVPFTHANISSAQ+EFGY+P+TDLQTGLKKFVRWYL YY GK+V Sbjct: 337 GKKR--GAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYLGYYKQG-GKKV 430
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: GAE3_ARATH (UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.050e-31 Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = -3 Query: 298 GRKRSGGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRGKR 585 G+KR G A R+FNLGNTSPV V LV ILER LKVKAK+N++++P NGDV FTHANISSAQ+E GY+PTTDLQTGLKKF RWYL Y YN GK+ Sbjct: 336 GKKR--GAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARWYLGY--YNGGKK 427
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: GAE6_ARATH (UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27 Identity = 58/90 (64.44%), Postives = 73/90 (81.11%), Query Frame = -3 Query: 316 GRKRSGGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYG 585 G+KR G A R++NLGNTSPV V +LV+ILE L KAKK++I+MP NGDVP+THAN+S A K+FGY+PTTDL GL+KFV+WY+ YYG Sbjct: 357 GKKR--GQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYYG 444
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: GAE5_ARATH (UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.053e-27 Identity = 58/95 (61.05%), Postives = 75/95 (78.95%), Query Frame = -3 Query: 301 GRKRSGGPAPYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYYGYNRGK 585 G+K+ GPA +RI+NLGNTSPV V KLV ILE+ LK+KAKK ++ +P NGDV FTHANI+ AQ E GY+P DL+TGLKKFV+WY+ +Y ++ K Sbjct: 341 GKKK--GPAMFRIYNLGNTSPVPVTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGFYTGSKKK 433
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: CAPI_STAAU (Protein capI OS=Staphylococcus aureus GN=capI PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.974e-14 Identity = 34/81 (41.98%), Postives = 54/81 (66.67%), Query Frame = -3 Query: 319 APYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 561 APY+++N+GN SPV + + V +E L +A+KN +++ GDVP T+AN+ ++ ++P T +Q G+ KFV WYL YY Sbjct: 253 APYKVYNIGNNSPVRLMEFVEAIENKLGKEARKNYMDLQP-GDVPETYANVDDLFRDIDFKPETTIQDGVNKFVDWYLEYY 332
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: Y1055_METJA (Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii GN=MJ1055 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12 Identity = 32/76 (42.11%), Postives = 51/76 (67.11%), Query Frame = -3 Query: 328 YRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYL 555 Y IFNLGN+ PV + + ++E++L KAKK + M +GDV T+A++S ++K GY+P ++ GLK+F W+L Sbjct: 243 YEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQ-DGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWFL 317
BLAST of DC887869 vs. ExPASy Swiss-Prot
Match: YCL2_ECO11 (Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.078e-11 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = -3 Query: 319 APYRIFNLGNTSPVTVPKLVNILERHLKVKAKKNVIEMPGNGDVPFTHANISSAQKEFGYRPTTDLQTGLKKFVRWYLSYY 561 APYR++N+GN+SPV + + LE L ++AKKN++ + GDV T A+ + + G+ P T ++ G+K FV WY +Y Sbjct: 253 APYRVYNIGNSSPVELMDYIQALEDALGIEAKKNMLPLQ-PGDVLETSADTKALYEVIGFTPETTVKDGVKNFVNWYRDFY 332 The following BLAST results are available for this feature:
BLAST of DC887869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887869 ID=DC887869; Name=DC887869; organism=Citrus sinensis; type=EST; length=629bpback to top |