CN185416

Overview
NameCN185416
Unique NameCN185416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185416 vs. ExPASy Swiss-Prot
Match: WNK4_ARATH (Probable serine/threonine-protein kinase WNK4 OS=Arabidopsis thaliana GN=WNK4 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.690e-16
Identity = 63/157 (40.13%), Postives = 87/157 (55.41%), Query Frame = -2
Query:  266 SSSHASLPAFFTNN--ANSPPSWLQQEDLLGNDDASSNGSVSSFKYSSWDYHSGNEDDSEFSHRAGEPLCIARATQKSTRFCPEAA--MNNDRCNSEDVNSRKACRSNSNNHRKLSRIRSLVDVRSQLLHRSLVEEIHKRRLFKTVGAVENIGFHEP 724
            SSSHAS      +N  A     W+Q +DL  +D+  S  S  S  YS+ +Y + +E  S+          +   T   TRFCPE +  + + + N+   +S    RS ++++R L+R RSLVDV+ QLLHRS  EE  KRRLFKTVG VE +GF  P
Sbjct:  415 SSSHASSSQASLSNYMARGLQDWVQ-DDL--HDETYSQSSSHSGSYSNLNYIAVDEYSSQSP--------VMSRTHNMTRFCPEESSHLQSGQANAYAASS-STNRSLASDNRTLTRNRSLVDVQRQLLHRSPGEEARKRRLFKTVGDVETVGFQSP 559          
BLAST of CN185416 vs. ExPASy Swiss-Prot
Match: WNK8_ORYSJ (Probable serine/threonine-protein kinase WNK8 OS=Oryza sativa subsp. japonica GN=WNK8 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.561e-11
Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = -2
Query:  224 ANSPPSWLQQEDLLGNDDASSNGSVSSFKYSSW--DY--------HSGNEDDSEFSHRAGEPLCIARATQ----KSTRFCPEAAMNNDRCNSEDVNSRKACRSNSNNHRKLSRIRSLVDVRSQLLHRSLVEEIHKRRLFKTVGAVENIGFHEPANCAAYGRCPVSRS 682
            ++SP S   Q  L G    SS G         W  DY           ++DDS  S  +     I+   Q     S+R  P +A  ++         R+         R++SR RS+VD+RSQLLHR+LVEE++KR  F TVGAV +IGF +P     YG    S S
Sbjct:  439 SSSPTS--SQGSLCGVGPTSSEGFPGPHGKVDWSRDYCYYPPSSVSVSDDDDSSTSSLSAAVSAISLQQQHCSASSSRLGPASASASEDGGGHAGRPRQREGEEERRRRRMSRNRSMVDMRSQLLHRTLVEELNKRLFFNTVGAVHDIGFRDP---TTYGSSSSSSS 600          
BLAST of CN185416 vs. ExPASy Swiss-Prot
Match: WNK7_ORYSJ (Probable serine/threonine-protein kinase WNK7 OS=Oryza sativa subsp. japonica GN=WNK7 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.039e-11
Identity = 50/141 (35.46%), Postives = 68/141 (48.23%), Query Frame = -2
Query:  251 PPSWLQQEDLLGNDDASSNGSVSSFKYSSWDYHSGNEDDSEFSHRAGEPLCIARATQKSTRFCPEAAMNNDRCNSEDVNSRKACRSNSNNHRKLSRIRSLVDVRSQLLHRSLVEEIHKRRLFKTVGAVENIGFHEPANCAA 673
            PPS +   D    DD SS  S+S+   S+   H   +  S  S R G                  A+ + D         R+         R++SR RS+VD+RSQLLHR+LVEE++KR  F TVGAV +IGF +P   A+
Sbjct:  478 PPSSVSVSD----DDDSSTSSLSA-AVSASSLHQQQQHCSASSSRLGPA---------------SASASEDGGGGHAGRPRQREGEEERRRRRMSRNRSMVDMRSQLLHRTLVEELNKRLFFNTVGAVHDIGFRDPTAAAS 598          
The following BLAST results are available for this feature:
BLAST of CN185416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
WNK4_ARATH4.690e-1640.13Probable serine/threonine-protein kinase WNK4 OS=A... [more]
WNK8_ORYSJ1.561e-1134.13Probable serine/threonine-protein kinase WNK8 OS=O... [more]
WNK7_ORYSJ2.039e-1135.46Probable serine/threonine-protein kinase WNK7 OS=O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001E22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185416 ID=CN185416; Name=CN185416; organism=Citrus sinensis; type=EST; length=782bp
CGGGCCCCCTTTTTTTTTATTGCAATCAAGCCCACCATTTTATTTTATTT
ATATCAACTGGCCCTTGGGGCGCTCCTATTATTGCAACAGACCGAGATTT
TCACCTCTCACAAGGTTCAGTAGTTTTTAATTTTACACAACAAAAGCATT
CATTAAACACACCAGAAAGCAAAAACAATTTTTACAATATCATCATTGTG
GAATCTGCTTCAAATGTTGGTCATGATCTGGAAACGGGGCATCTTCCGTA
AGCGGCACAATTAGCTGGCTCATGAAACCCAATGTTCTCAACAGCACCAA
CCGTCTTAAACAGTCGCCTCTTGTGGATTTCCTCCACCAGTGACCTGTGC
AACAACTGGCTCCGTACATCCACCAGTGACCGAATCCTGGATAATTTCCT
GTGGTTATTACTGTTTGACCTACAAGCTTTCCGGGAATTTACATCTTCAC
TATTGCAGCGGTCATTGTTCATAGCAGCTTCAGGGCAGAATCTTGTAGAT
TTTTGAGTTGCCCTTGCAATGCAGAGTGGCTCTCCTGCTCTGTGGCTGAA
CTCAGAATCATCTTCATTGCCTGAGTGGTAATCCCAGCTTGAGTACTTGA
AAGAACTAACAGAACCATTGGAACTCGCATCATCATTGCCCAACAAGTCT
TCTTGTTGAAGCCAACTGGGAGGAGAATTCGCATTGTTTGTGAAGAAAGC
TGGGAGAGAAGCGTGCGACGAGGATTAAAATTAAACCACACAAGGCCACG
GTCATGGGCATGGCCATATATTACATGATTAT
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