DC887847
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887847 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.273e-26 Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = -1 Query: 8 LLLFVSPSLASESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXLID-SQIDIKFQRNVDKATICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDN 412 LLL + + A E +H YQ E V LW+N VGPY+N QETY Y+SLPFC S + ++ S +DIKF+ +V AT C +DLD+ K F AI+N+YW++ ++DDLP+WG VG+ D+N ++ Sbjct: 19 LLLLLPRTRADEHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPATYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGE--ADENGED 152
BLAST of DC887847 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 8.251e-26 Identity = 56/136 (41.18%), Postives = 82/136 (60.29%), Query Frame = -1 Query: 8 LLLFVSPSLASESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXLID-SQIDIKFQRNVDKATICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDN 412 LLL + + + E +H YQ E V LW+N VGPY+N QETY Y+SLPFC S + ++ S +DIKF+ +V T C +DLD+ K F AI+N+YW++ ++DDLP+WG VG+ D+N ++ Sbjct: 17 LLLLLPRARSDEHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPGTYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGE--ADENGED 150
BLAST of DC887847 vs. ExPASy Swiss-Prot
Match: TM9S1_BOVIN (Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.539e-23 Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = -1 Query: 38 LLLFVSPSLASESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXLIDSQIDIKFQRNVDKATICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVG 412 LLL E Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK + +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG Sbjct: 20 LLLLTGREPGVEGVTHYKAGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRVLCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVG 143
BLAST of DC887847 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.457e-22 Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = -1 Query: 38 LLLFVSPSLASESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXLIDSQIDIKFQRNVDKATICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVG 412 LLL + E Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK + +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG Sbjct: 20 LLLGIGHGPRVEGVTHYKPGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVG 143
BLAST of DC887847 vs. ExPASy Swiss-Prot
Match: TM9S1_PONAB (Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.484e-22 Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = -1 Query: 38 LLLFVSPSLASESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXLIDSQIDIKFQRNVDKATICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVG 412 LLL E Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK + +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG Sbjct: 20 LLLGTGHGPGVEGVTHYKAGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVG 143
BLAST of DC887847 vs. ExPASy Swiss-Prot
Match: TM9S1_MOUSE (Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 2.484e-22 Identity = 54/125 (43.20%), Postives = 74/125 (59.20%), Query Frame = -1 Query: 38 LLLFVSPSLASESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXLIDSQIDIKFQRNVDKATICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVG 412 LLL + E Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK + +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG Sbjct: 20 LLLGIGHGPWVEGVTHYKPGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVG 143
BLAST of DC887847 vs. ExPASy Swiss-Prot
Match: TM9S1_HUMAN (Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 2.484e-22 Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = -1 Query: 38 LLLFVSPSLASESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXLIDSQIDIKFQRNVDKATICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVG 412 LLL E Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK + +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG Sbjct: 20 LLLGTGHGPGVEGVTHYKAGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVG 143
BLAST of DC887847 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.842e-15 Identity = 38/115 (33.04%), Postives = 63/115 (54.78%), Query Frame = -1 Query: 38 SESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXLIDSQIDIKFQRNVDKATICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVG 382 S + H +++++ V +VN VGPY+NP ETY +Y+LPFC S + ++K + S F+ + + +C L + +++FK AI Y+ E DDLP++ FVG Sbjct: 23 SSNKHHFKENDEVPFYVNNVGPYSNPTETYEFYTLPFCKPS-SISYKKTKLGEILQGDSAVLSDYQFPFKSSFENKQLCEYTLKKEDIEKFKKAIGEYYYAEMIYDDLPIFSFVG 136 The following BLAST results are available for this feature:
BLAST of DC887847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887847 ID=DC887847; Name=DC887847; organism=Citrus sinensis; type=EST; length=412bpback to top |