CN185387

Overview
NameCN185387
Unique NameCN185387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig484 contig Csv1_Contig484:813..1638. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: NDRB_DICDI (Probable serine/threonine-protein kinase ndrB OS=Dictyostelium discoideum GN=ndrB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.498e-18
Identity = 53/139 (38.13%), Postives = 74/139 (53.24%), Query Frame = -1
Query:  406 KIVNWKTCL-KFPEEPK----ISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVLKSLENSGTDMRSNGS 807
            KI+NWK  L K  EE K    +S EA+DLI   L D  TR+G  GVEE++ HP+F+G+ W +L E      P ++   DT NF+ + E   P    P     R+ +TS D  FIGYT++  D ++    S     + GS
Sbjct:  383 KIMNWKQTLPKIMEEAKAEVNLSPEAQDLIERFLTDPMTRIGFNGVEEIQSHPFFKGVDWRRLRETRPPIIPQLSSPTDTSNFDHYEEEQQPEPMQPVQSKSRRKITSFDIPFIGYTYRNFDAMRDAFGSVNSRDAFGS 521          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: ST38L_HUMAN (Serine/threonine-protein kinase 38-like OS=Homo sapiens GN=STK38L PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 4.260e-18
Identity = 51/131 (38.93%), Postives = 72/131 (54.96%), Query Frame = -1
Query:  415 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVLKSLENSGTDMRS 807
            K++NWK  L FP E  IS++A+DLI     D E R+G  GVEE+K HP+F G+ W+ + E  AA    +    DT NF+ FPE D       +  P  K   SKD  F+ YT+K+ + L    +  T M++
Sbjct:  334 KVMNWKETLVFPPEVPISEKAKDLILRFCIDSENRIGNSGVEEIKGHPFFEGVDWEHIRERPAAIPIEIKSIDDTSNFDDFPESDILQPVPNTTEPDYK---SKDWVFLNYTYKRFEGLTQRGSIPTYMKA 461          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: TRC_DROME (Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.491e-18
Identity = 49/119 (41.18%), Postives = 73/119 (61.34%), Query Frame = -1
Query:  454 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT-RGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDV 807
            K++NW+  L FP E  IS+EA++ I +  C+ + RLG+ RG+E+LK  P+FRG+ W+ + E  AA    V    DT NF++FP+V     EIPS    +    +KD  FI YT+K+ +V
Sbjct:  344 KVMNWRETLIFPPEIPISEEAKETIINFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVS---LEIPSAPIPQGGEIAKDWVFINYTYKRFEV 459          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: TRC_DROPS (Serine/threonine-protein kinase tricorner OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.619e-17
Identity = 49/119 (41.18%), Postives = 72/119 (60.50%), Query Frame = -1
Query:  454 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT-RGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDV 807
            K++NW+  L FP E  IS+EA++ I    C+ + RLG+ RG+E+LK  P+FRG+ W+ + E  AA    V    DT NF++FP+V     EIPS    +    +KD  FI YT+K+ +V
Sbjct:  339 KVMNWRETLIFPPEIPISEEAKETIIKFCCEADRRLGSQRGLEDLKSVPFFRGVDWEHIRERPAAIPVEVRSIDDTSNFDEFPDVS---LEIPSAPIPQGGEIAKDWVFINYTYKRFEV 454          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: STK38_PONAB (Serine/threonine-protein kinase 38 OS=Pongo abelii GN=STK38 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = -1
Query:  451 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVL 807
            K++NWK  L FP E  IS++A+DLI    C+ E R+G  GVEE+K + +F G+ W+ + E  AA    +    DT NF++FPE D     + +         +KD  FI YT+K+ + L
Sbjct:  333 KVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYKNKDWVFINYTYKRFEGL 451          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: STK38_HUMAN (Serine/threonine-protein kinase 38 OS=Homo sapiens GN=STK38 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.114e-17
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = -1
Query:  451 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVL 807
            K++NWK  L FP E  IS++A+DLI    C+ E R+G  GVEE+K + +F G+ W+ + E  AA    +    DT NF++FPE D     + +         +KD  FI YT+K+ + L
Sbjct:  333 KVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKSNSFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPETDYKNKDWVFINYTYKRFEGL 451          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: STK38_BOVIN (Serine/threonine-protein kinase 38 OS=Bos taurus GN=STK38 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.607e-17
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = -1
Query:  451 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVL 807
            K++NWK  L FP E  IS++A+DLI    C+ E R+G  GVEE+K + +F G+ W+ + E  AA    +    DT NF++FPE D     + +         +KD  FI YT+K+ + L
Sbjct:  333 KVMNWKETLTFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKNNSFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVATSNHPDTDYKNKDWVFINYTYKRFEGL 451          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: ST38L_MOUSE (Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.710e-17
Identity = 49/131 (37.40%), Postives = 71/131 (54.20%), Query Frame = -1
Query:  415 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVLKSLENSGTDMRS 807
            K+++WK  L FP E  +S++A+DLI     D E R+G  GVEE+K HP+F G+ W  + E  AA    +    DT NF+ FPE D       +  P  K   SKD  F+ YT+K+ + L    +  T M++
Sbjct:  334 KVMSWKETLAFPPEVPVSEKAKDLILRFCTDSENRIGNGGVEEIKGHPFFEGVDWGHIRERPAAIPIEIRSIDDTSNFDDFPESDILQPVPNTTEPDYK---SKDWVFLNYTYKRFEGLTQRGSIPTYMKA 461          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: CBK1_PNECA (Serine/threonine-protein kinase CBK1 OS=Pneumocystis carinii GN=CBK1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.049e-16
Identity = 46/121 (38.02%), Postives = 68/121 (56.20%), Query Frame = -1
Query:  451 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTN--FIGYTFKKSDVL 807
            KI+NW+  L FPE+  +S EA DLI  LL   + RLG  G  ++K HP+FRG+ WD + E+ A + P +    DT  FE+   +       P V    K+ +  D N  F+GYT+K+ D++
Sbjct:  382 KIINWRENLYFPEDLHLSAEAEDLIRKLLTSADQRLGRYGANDIKLHPFFRGVNWDTIREINAPFIPQLKSITDTSYFEEIDTIPNITMNSPPV-LQNKIPSDVDQNLAFVGYTYKRFDMM 501          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: STK38_MOUSE (Serine/threonine-protein kinase 38 OS=Mus musculus GN=Stk38 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.053e-16
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = -1
Query:  451 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVL 807
            K++NWK  L FP E  +S++A+ LI    C+ E R+G  GVEE+K + +F G+ W+ + E  AA    +    DT NF++FPE D     + +         +KD  FI YT+K+ + L
Sbjct:  333 KVMNWKETLTFPPEVPVSEKAKGLILRFCCEWEHRIGAPGVEEIKNNLFFEGVDWEHIRERPAAISIEIKSIDDTSNFDEFPESDILKPTVTTSSHPETDYKNKDWVFINYTYKRFEGL 451          
The following BLAST results are available for this feature:
BLAST of CN185387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
NDRB_DICDI2.498e-1838.13Probable serine/threonine-protein kinase ndrB OS=D... [more]
ST38L_HUMAN4.260e-1838.93Serine/threonine-protein kinase 38-like OS=Homo sa... [more]
TRC_DROME9.491e-1841.18Serine/threonine-protein kinase tricorner OS=Droso... [more]
TRC_DROPS1.619e-1741.18Serine/threonine-protein kinase tricorner OS=Droso... [more]
STK38_PONAB2.114e-1737.82Serine/threonine-protein kinase 38 OS=Pongo abelii... [more]
STK38_HUMAN2.114e-1737.82Serine/threonine-protein kinase 38 OS=Homo sapiens... [more]
STK38_BOVIN3.607e-1737.82Serine/threonine-protein kinase 38 OS=Bos taurus G... [more]
ST38L_MOUSE4.710e-1737.40Serine/threonine-protein kinase 38-like OS=Mus mus... [more]
CBK1_PNECA1.049e-1638.02Serine/threonine-protein kinase CBK1 OS=Pneumocyst... [more]
STK38_MOUSE3.053e-1636.13Serine/threonine-protein kinase 38 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001E05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185387 ID=CN185387; Name=CN185387; organism=Citrus sinensis; type=EST; length=828bp
TTTTTTTTTTTTTTTTTGAGCTTAATCCAGGCTTTACATTAGCTCTTATT
TATTATATCAGTATAAGAAAGAATTGAACATATTTTCGGGCTTCACAGTA
ACTCTGATAGATGACATTTGCAGTACGAAAAAAAAAGAATTACGCTTGAG
ATCACATCGACTTTTAGGCTGACCTCCTTATTCTCGGGTCGTTACTCCCC
ACAGTTCTTTGCCATAATCGGTTTTTATACAAAACCTGCTTTTGAAGGTT
ATACACGCAATGGAATAAAAATAGGAACGGAACTCCCGAATAAGTAAAAC
AGAATGATCCACTCAGGTTTCCTGCTTCTGCTGATCACACTCTGAAATGG
CAGTTTCCTGCACGTCAATCCTACCTAACAAAGAAATCAAAGAGGGAACT
TTTGATGATCCATTCGACCTCATGTCCGTACCTGAATTTTCAAGTGATTT
AAGGACATCAGATTTCTTAAATGTATATCCGATAAAATTGGTATCTTTTG
ATGTCAGCATCTTTCTCCAAGGTCCCACACTTGGTATCTCCGATGGTGGG
CCGTCTACTTCTGGAAACTTCTCAAAATTCTGAGTATCCAGCTCCCCATT
GACTGTAGGCTTATATGCAGCTTCCATTTCATACAACTTGTCCCATTGGA
TTCCTCTGAACCATGGATGTTCCTTCAATTCTTCAACTCCTCTGGTTCCA
AGCCTTGTCTCAACATCACAGAGCAAGTGACAAATCAGATCCCTAGCCTC
ATCTGATATTTTTGGTTCTTCAGGGAATTTCAGGCATGTTTTCCAATTGA
CTATCTTGGCGGCATGTGATCCTTGGAT
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