DC887814

Overview
NameDC887814
Unique NameDC887814
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length179
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.257e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL
Sbjct:  479 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 537          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.801e-26
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL
Sbjct:  469 YITGESKKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 527          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.239e-26
Identity = 57/59 (96.61%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLERLKKKGYEVL+MVDAIDEYAVGQLKEYDGKKLVSATKEGLKL
Sbjct:  265 YITGESKKAVENSPFLERLKKKGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 323          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 1.390e-25
Identity = 56/59 (94.92%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLERLKK+GYEVL+MVDAIDEYAVGQLKEYDGKKLVSATKEGLKL
Sbjct:  465 YITGESKKAVENSPFLERLKKRGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 523          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.177e-24
Identity = 54/59 (91.53%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLE+LKKKGYEVL+MVDAIDEYAVGQLKE++GKKLVSATKEGLKL
Sbjct:  466 YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL 524          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.177e-24
Identity = 54/59 (91.53%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLE+LKKKGYEVL+MVDAIDEYAVGQLKE++GKKLVSATKEGLKL
Sbjct:  466 YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL 524          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 1.177e-24
Identity = 54/59 (91.53%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLE+LKKKGYEVL+MVDAIDEYAVGQLKE++GKKLVSATKEGLKL
Sbjct:  466 YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL 524          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.177e-24
Identity = 54/59 (91.53%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLE+LKKKGYEVL+MVDAIDEYAVGQLKE++GKKLVSATKEGLKL
Sbjct:  466 YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKL 524          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24
Identity = 52/59 (88.14%), Postives = 59/59 (100.00%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLE+LKKKGYEVL+MVDAIDEY++GQLKE++GKKLVSATKEGLKL
Sbjct:  464 YITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKL 522          
BLAST of DC887814 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.301e-23
Identity = 52/59 (88.14%), Postives = 58/59 (98.31%), Query Frame = -2
Query:    2 YITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATKEGLKL 178
            YITGES+KAVENSPFLE+LKKKG EVL+MVDAIDEYA+GQLKE++GKKLVSATKEGLKL
Sbjct:  464 YITGESKKAVENSPFLEKLKKKGIEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKL 522          
The following BLAST results are available for this feature:
BLAST of DC887814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
HSP82_MAIZE1.257e-26100.00Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]
HSP83_IPONI2.801e-2698.31Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP82_TOBAC6.239e-2696.61Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HSP81_ARATH1.390e-2594.92Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP83_ORYSJ1.177e-2491.53Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ1.177e-2491.53Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSJ1.177e-2491.53Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI1.177e-2491.53Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP80_SOLLC3.423e-2488.14Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP83_ARATH1.301e-2388.14Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionDC887814 EIC Citrus sinensis cDNA clone EIC0928 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887814 ID=DC887814; Name=DC887814; organism=Citrus sinensis; type=EST; length=179bp
TCAGTTTTAGCCCCTCTTTGGTGGCTGAGACAAGCTTCTTTCCATCGTAC
TCTTTCAACTGACCAACAGCATACTCATCAATGGCATCCACCATGAAAAG
CACTTCGTAGCCCTTCTTCTTGAGTCTCTCGAGGAATGGAGAGTTCTCAA
CAGCCTTCCGACTCTCACCAGTGATATAG
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