CN185340

Overview
NameCN185340
Unique NameCN185340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13771 contig Csv1_Contig13771:1174..1891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.245e-65
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = -1
Query:  358 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 717
            RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA
Sbjct:  375 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.080e-48
Identity = 87/120 (72.50%), Postives = 102/120 (85.00%), Query Frame = -1
Query:  358 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 717
            +K EA+KQ  E MSHRMH+D S++L+GKLLFGIEK PE+LN VRPAG  LVDDW CLK++VRTFE+HCG+LSQYGMKHMRS AN+CN GI KE+M EASAQAC  IP+ PWSSL +GFSA
Sbjct:  365 KKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.997e-47
Identity = 87/120 (72.50%), Postives = 103/120 (85.83%), Query Frame = -1
Query:  358 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 717
            +K EA+KQ  EAMSHR H+D+S+KLIG+LLFGIEKG E+L+ VRPAG PLVD+W CLK++V+TFE+HCG+LSQYGMKHMRS ANICN GI  E MAEASAQAC +IP+ PWSSL  GFSA
Sbjct:  374 QKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 2.608e-47
Identity = 84/120 (70.00%), Postives = 102/120 (85.00%), Query Frame = -1
Query:  358 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 717
            RK EAQKQ  EAMSHR+H+D+S+ L+GK+LFGI +GPE+LN VR AGQPLVDDW CLK+ VR FE HCG+LSQYG+KHMRS ANICN GI  E+M EA++QAC  +P+GPWSSL++GFSA
Sbjct:  375 RKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.066e-44
Identity = 85/120 (70.83%), Postives = 99/120 (82.50%), Query Frame = -1
Query:  358 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 717
            RK EAQKQ  EAMSHR+HVD+SI LIG LLFG+E G  +LN VRP+G+PLVDDW CLKSLVR FE HCG+LSQYG+KHMRS+AN+CN GI   +M EA+ QAC  IP+ PWSSLD+GFSA
Sbjct:  360 RKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.042e-32
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = -1
Query:  358 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 717
            +K E  +Q  +A+ HR H+D S++LIG LLFG +K   IL +VR  G PLVDDWGCLKS+VR FE+ CG+L+QYGMKHMR+ ANICN G+    M EA   AC    +G W   ++G+SA
Sbjct:  378 KKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.006e-31
Identity = 62/119 (52.10%), Postives = 82/119 (68.91%), Query Frame = -1
Query:  358 KAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 714
            K +  KQ  E + HR H+D S++LIG LL+G  KG  +L +VR  G  LVDDW CLKS+VR FE+HCG L+QYGMKHMR+ ANICN+G+ +  M EA   ACE   +G +   ++G+SA
Sbjct:  377 KTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30
Identity = 60/120 (50.00%), Postives = 82/120 (68.33%), Query Frame = -1
Query:  358 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 717
            +K +  KQ  E + HR H+D S++LIG LL+G EK   +L +VR  G PLVDDW CLKS+VR +E+HCG+L+QYGMKHMR+ ANICN+G+ +  M +A   AC    +G     + G+SA
Sbjct:  374 KKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.202e-29
Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = -1
Query:  358 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 717
            +K    +Q  E + HR H+D S++LIG LL+G  K   +L++VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+  N+CN+G+ K  M EA   AC    +G     + G+SA
Sbjct:  356 KKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of CN185340 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27
Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = -1
Query:  409 RKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQAC 717
            +K +  K+  E   HR H+D S++LI  +LFG      +LN VR  G PLVDDW CLKS+VR FE HCG+L+QYGMKHMR+ AN+CN G+ KE M EAS  AC
Sbjct:  367 KKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAAC 467          
The following BLAST results are available for this feature:
BLAST of CN185340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_CITSI1.245e-65100.00Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPE1_PHAVU3.080e-4872.50Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_VICSA1.997e-4772.50Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPEG_ARATH2.608e-4770.00Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPEA_ARATH2.066e-4470.83Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
VPE_RICCO4.042e-3253.33Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
VPE_SOYBN2.006e-3152.10Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE2_PHAVU4.941e-3050.00Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
LEGU_CANEN3.202e-2949.17Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH2.295e-2755.34Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185340 ID=CN185340; Name=CN185340; organism=Citrus sinensis; type=EST; length=717bp
AGGTTTTTTTTTAATCCAAAATTAGAGCTTTTATTTCAATATTTAGAGCA
ACACCACGAAGAGGGTTGAGTTGCACGGTCTACAAATCAGGAACAAATAT
AGCTACATAAGCATAAAATAGCATCGCATACATCCAAAATATATACTATC
AAATTACAACTGCGGTCTGGCAGGGAAGAGCTTTTAAATATAATAATTAC
AAGGAAGCAATCACCAGCCAAATGAAAATAGACATTGCCATAAATGGAAG
CAATCATCAGCCAAATGAAAATAGATATTGCCATATTGGCGACTATAATG
AAAACTAACATATTTCAAGACTGGCTTATGATATTCGCACAGTTCTCGGC
TTCTTTATGCACTGAATCCTTTGTCGAGAGAACTCCAAGGACCAGAAGGA
ATATTTTCACAGGCTTGTGCTGATGCTTCAGCCATCTTCTCTTTCCCAAT
TCCTGTATTACAGATGTTTGCAAGAGAACGCATGTGCTTCATTCCATATT
GCGATAGAGCTCCACAGTGCGACTCAAAAGTCCTCACCAGTGATTTGAGG
CAGCCCCAGTCATCAACAAGAGGCTGACCAGCAGGTCGAACAGTGTTCAA
GATCTCTGGACCTTTCTCAATTCCAAATAAGAGCTTTCCAATAAGTTTGA
TGCTGTGGTCTACATGCATTCTATGAGACATTGCTTCAAAAAACTGCTTC
TGAGCTTCAGCCTTCCT
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