DC887802

Overview
NameDC887802
Unique NameDC887802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length505
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:436..940. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 1.576e-29
Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = -2
Query:  247 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 504
            ++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:  124 LYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAKKVL 209          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.058e-29
Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = -2
Query:  247 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 504
            ++GMTTD   VEE EAKLAK+LDVYE RL +SKYLA D FTLVDLH +P I  LLGTP KKLFD RPHVSAW ADITSRP+  KVL
Sbjct:  123 LYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLGTPTKKLFDERPHVSAWVADITSRPSAQKVL 208          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.988e-29
Identity = 59/86 (68.60%), Postives = 67/86 (77.91%), Query Frame = -2
Query:  247 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 504
            M GM TD AAV ENE KL K+LDVYE+RL  SKYL  DSFTL DLHH P +N L+GT VK LFD+RPHVSAW ADI +RPAW+K +
Sbjct:  123 MLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKSLFDSRPHVSAWCADILARPAWSKAI 208          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 125.946 bits (315), Expect = 1.021e-28
Identity = 62/90 (68.89%), Postives = 73/90 (81.11%), Query Frame = -2
Query:  235 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 504
            MFGMTTDPAAV+E E KL K+LDVYEARL++S++LA DSFTL DLHHLP I+ LLGT  K LFD+RP VS W   I++RPAWAKV+ L K
Sbjct:  173 MFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAKVIDLQK 262          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 5.070e-28
Identity = 62/91 (68.13%), Postives = 72/91 (79.12%), Query Frame = -2
Query:  235 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYL-ACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 504
            +FGM TD   VEENEAKLAK+LDVYEARL++S+YL A DSFTLVDLHHLP +  L+GT VKKLF+ R HVSAW   I +RP+W K LAL K
Sbjct:  125 IFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHVSAWCKKILARPSWEKTLALQK 215          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.926e-27
Identity = 56/90 (62.22%), Postives = 74/90 (82.22%), Query Frame = -2
Query:  235 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 504
            + GMTTD AAV+E+EA+L+K+LD+YE +L++SKYL  DSFTLVDLHH+PNI  L+ + VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:  123 IIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.286e-27
Identity = 56/90 (62.22%), Postives = 72/90 (80.00%), Query Frame = -2
Query:  235 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 504
            + GMTTD  AV+E+E +L+K+LD+YE RL++SKYL  DSFTLVDLHH+PNI  L+ T VK++FD+RP VSAW ADI +RPAW K L  L+
Sbjct:  123 IIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRVSAWCADILARPAWVKGLEKLQ 212          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 2.355e-25
Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = -2
Query:  250 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 504
            ++G+TTD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KV
Sbjct:  127 IYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKV 211          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.246e-25
Identity = 55/85 (64.71%), Postives = 64/85 (75.29%), Query Frame = -2
Query:  247 FGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVL 501
            +G+ TD A V E EAKLAK+LDVYEARL + KYLA ++FTL DLHH+P I  LLGTP KKLF  RP V+ W A+IT RPA  KVL
Sbjct:  128 YGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRVNEWVAEITKRPASEKVL 212          
BLAST of DC887802 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 85.8853 bits (211), Expect = 1.171e-16
Identity = 44/90 (48.89%), Postives = 57/90 (63.33%), Query Frame = -2
Query:  235 MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 504
            M G TTD   V+EN  KL K+L+VYEARL++ KYLA D  +L DL+H+     L  TP   + DA PHV AW + +  RP+  KV AL+K
Sbjct:  122 MLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
The following BLAST results are available for this feature:
BLAST of DC887802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
GST11_ARATH1.576e-2973.26Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF1_ARATH2.058e-2973.26Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GSTF_HYOMU5.988e-2968.60Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF6_ARATH1.021e-2868.89Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF_SILCU5.070e-2868.13Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF1_TOBAC1.926e-2762.22Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF2_TOBAC3.286e-2762.22Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF4_ARATH2.355e-2564.71Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GST16_ARATH5.246e-2564.71Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF1_MAIZE1.171e-1648.89Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]

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Properties
Property NameValue
Genbank descriptionDC887802 EIC Citrus sinensis cDNA clone EIC0906 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887802 ID=DC887802; Name=DC887802; organism=Citrus sinensis; type=EST; length=505bp
TTAGATAAAATAAAAACCTCAAGCCATCAACATCAAAGTTGAATATGAGG
CAGTGCTGTTGAAATACAAAAGCGGTAGTACAAACTACAAAGCATCAATA
TTCTGCAGAATATTGATGACAAACGCCAAACAAGAGAATACGAACTCGAA
AACCAGCCTAATAGGTATTACAAAAGATAAGTGACCACCGAGGAGCGACT
AACGTCTAGTAGGTAGCGGGCAGAGTGTTCAGTGTTTGAGCAAGGCAAGG
ACCTTAGCCCAAGCCGGTCTGGAAGTGATATCAGCTGCCCATGCGCTAAC
ATGGGGGCGTGCATCAAACAGCTTCTTGACAGGCGTCCCCAACAACAAAT
TAATATTGGGGAGATGATGCAAATCGACCAAGGTGAAGCTGTCGCACGCC
AAGTATTTGGACTGAGACAAACGGGCCTCGTAAACATCTAAAATTTTGGC
AAGCTTAGCTTCATTTTCTTCAACCGCAGCTGGATCAGTGGTCATTCCAA
ACATT
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