CN185335
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_RAT (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Rattus norvegicus GN=Ndufs4 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22 Identity = 53/125 (42.40%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 98 SRAFSADALVEVKPGEIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 ++ + D ++V P ++G+PEEH++ R+V I+ PAR Q G +WK+ F + ++WENPLMGW ST DP +N+ L+F +KE A FAE+HGW Y V P K KSY NF W Sbjct: 50 TQLITVDEKLDVTP-----LTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNM---VLTFSAKEDAVAFAEKHGWSYDVEGRKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_MOUSE (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Mus musculus GN=Ndufs4 PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 5.531e-22 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 143 EIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 +I ++G+PEEH++ R+V I+ PAR Q G +WK+ F + ++WENPLMGW ST DP +N+ L+F +KE A FAE++GW Y V + P K KSY NF W Sbjct: 60 DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNM---VLTFSAKEDAIAFAEKNGWSYDVEEKKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_HUMAN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Homo sapiens GN=NDUFS4 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.223e-22 Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 143 EIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 +I ++G+PEEH++ R+V I+ PAR Q G +WK+ F + ++WENPLMGW ST DP +N+ L+F +KE A FAE++GW Y + + P K KSY NF W Sbjct: 60 DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_GORGO (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS4 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.223e-22 Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 143 EIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 +I ++G+PEEH++ R+V I+ PAR Q G +WK+ F + ++WENPLMGW ST DP +N+ L+F +KE A FAE++GW Y + + P K KSY NF W Sbjct: 60 DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_PONPY (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo pygmaeus GN=NDUFS4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 143 EIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 +I ++G+PEEH++ R+V I+ PAR Q G +WK+ F + ++WENPLMGW ST DP +N+ L+F +KE A FAE++GW Y V + P K KSY NF W Sbjct: 60 DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNM---VLTFRTKEDAVSFAEKNGWSYDVEERKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_PONAB (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pongo abelii GN=NDUFS4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.434e-22 Identity = 50/110 (45.45%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 143 EIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 +I ++G+PEEH++ R+V I+ PAR Q G +WK+ F + ++WENPLMGW ST DP +N+ L+F +KE A FAE++GW Y V + P K KSY NF W Sbjct: 60 DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNM---VLTFRTKEDAVSFAEKNGWSYDVEERKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_BOVIN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Bos taurus GN=NDUFS4 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.232e-21 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 143 EIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 +I ++G+PEEH++ R+ I+ PAR Q G +WK+ F + ++WENPLMGW ST DP +N+ L+F +KE A FAE++GW Y V + P K KSY NF W Sbjct: 60 DITTITGVPEEHIKTRKARIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNL---VLTFSTKEDAVAFAEKNGWSYDVEERKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_GECJA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Gecko japonicus GN=NDUFS4 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.609e-21 Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 2 Query: 143 EIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 +I ++G+PEEH++ R+V I+ PAR Q G +WK+ F + ++WENPLMGW+ST DP +N+ L+F +KE A FAE++GW + V + P K KSY NF W Sbjct: 60 DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWSSTADPLSNL---VLTFSTKEDAVAFAEKNGWSFDVEERKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_PANTR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial OS=Pan troglodytes GN=NDUFS4 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.682e-21 Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 2 Query: 143 EIGMVSGIPEEHLR-RRVVIYTPARTATQQGSGKLGRWKINFMSTQKWENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNFKW 469 +I ++G+PEEH++ R+V I+ PAR Q G +WK+ F + ++WENPLMGW ST DP +N+ L+ +KE A FAE++GW Y + + P K KSY NF W Sbjct: 60 DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWASTADPLSNM---VLTXSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSW 166
BLAST of CN185335 vs. ExPASy Swiss-Prot
Match: NDUS4_NEUCR (NADH-ubiquinone oxidoreductase 21 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-21 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.240e-14 Identity = 44/107 (41.12%), Postives = 67/107 (62.62%), Query Frame = 2 Query: 152 MVSGIPEEHLRRRVVIYTPARTATQQGSGKLGRWKINFMSTQK---WENPLMGWTSTGDPYANVGDAGLSFDSKEAAREFAERHGWEYVVRKPHRPLLKVKSYADNF 463 +VSG P E R V IY P++ ATQ + ++ W++++ +K WEN LMGW S+GD V L+F +KE A +FAE+ G+EY V++P++ K+YA+NF Sbjct: 103 VVSGAPMELQARTVRIYLPSKPATQSSNSRV-LWRMDWDVLEKGHRWENELMGWQSSGD---FVQGTHLTFRTKEEAIQFAEKQGYEYFVQEPNQRHFTPKAYANNF 205 The following BLAST results are available for this feature:
BLAST of CN185335 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185335 ID=CN185335; Name=CN185335; organism=Citrus sinensis; type=EST; length=655bpback to top |