DC887797
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.478e-57 Identity = 105/125 (84.00%), Postives = 113/125 (90.40%), Query Frame = -3 Query: 146 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIAV 520 + YA+HLKRSGKIELPTW DIVKTG LKELAPYDPDWYYIRAASMARK+Y RGGLGVG+ RRIYGG KRNGS PPHF KSSG +ARHIL QL+ NI+ELD+KGGRRITSSGQRDLDQVAGRIAV Sbjct: 17 KAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAV 141
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 2.740e-56 Identity = 104/124 (83.87%), Postives = 111/124 (89.52%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 + YAAHLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAASMARK+Y RGGLGVG+ RRIYGG KRNGS PPHF KSSG VARHIL QLQ NI++LD+KGGR+ITSSGQRDLDQVAGRIA Sbjct: 17 KAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIA 140
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.041e-55 Identity = 103/124 (83.06%), Postives = 111/124 (89.52%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 + YA+HLKRSGKIELP W DIVKTG LKELAPYDPDWYYIRAASMARKIY RGGLGVG+ RRIYGG KRNGS PPHF KSSG +ARHIL QL+ +I+ELD+KGGRRITSSGQRDLDQVAGRIA Sbjct: 17 KAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRIA 140
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_ORYSJ (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 9.769e-46 Identity = 86/125 (68.80%), Postives = 102/125 (81.60%), Query Frame = -3 Query: 146 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIAV 520 + Y+AHLKRSGK+ELP W DIVKT KEL PYDPDWYY RAAS+ARKIY R G+GVG ++IYGG +RNGS PPHF KSSG+++R+IL QLQ II++D KGGR ITS G+RDLDQVAGR+ V Sbjct: 19 KAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRVDV 143
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_MYAAR (40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.181e-37 Identity = 67/124 (54.03%), Postives = 93/124 (75.00%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 R +AA LK+SGK+++P W D VKTG KEL+PY+PDWY+IRAAS+ R +Y R G+GS +IYGG +R G+ P HF K++GS++R +L L+ I+E D GGRR+TS G+RDLD++A +IA Sbjct: 15 RAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQIA 138
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_BRABE (40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 3.150e-36 Identity = 69/124 (55.65%), Postives = 93/124 (75.00%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 + +AA LK+SGK++LP W D+VKT KELAPYDPDW+Y+RAAS AR +Y RGG+GVG+ +IYGG KR G+ P F S V+R +L L+ ++E D+ GGRR+TS GQRDLD++AG++A Sbjct: 17 KAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQVA 140
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_PONAB (40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 2.042e-35 Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 R AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +Y RGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 16 RALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_MYXGL (40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.042e-35 Identity = 67/124 (54.03%), Postives = 93/124 (75.00%), Query Frame = -3 Query: 140 AAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIAVVA 511 AA K+SGK++ P W D VK G KELAP+D DWYYIR AS+AR +Y RGG+GVG+ +IYGG +RNG+ P H+S+ S +VAR +L L+ ++E D GGRR+TS GQRD+D++AG++ V++ Sbjct: 19 AAFFKKSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMDRIAGQVVVLS 142
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_HUMAN (40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.042e-35 Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 R AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +Y RGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 16 RALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of DC887797 vs. ExPASy Swiss-Prot
Match: RS19_BOVIN (40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 2.042e-35 Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = -3 Query: 149 RPYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYFRGGLGVGSCRRIYGGGKRNGSCPPHFSKSSGSVARHILHQLQNTNIIELDSKGGRRITSSGQRDLDQVAGRIA 520 R AA LK+SGK+++P W D VK KELAPYD +W+Y RAAS AR +Y RGG GVGS +IYGG +RNG P HFS+ S SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 16 RALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139 The following BLAST results are available for this feature:
BLAST of DC887797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887797 ID=DC887797; Name=DC887797; organism=Citrus sinensis; type=EST; length=522bpback to top |