DC887789

Overview
NameDC887789
Unique NameDC887789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5620 contig Csv1_Contig5620:1..719. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887789 vs. ExPASy Swiss-Prot
Match: OLEO1_ORYSJ (Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 31/75 (41.33%), Postives = 50/75 (66.67%), Query Frame = -2
Query:  284 PLLILSSPIWVPIGTILFIAVAGFLSVCGFGVAVLAGLSWMYRYFNGMHPPGSNRFDYARSRIYDTASHVKDYAR 508
            P+L++ SP+ VP    L +  AGF++  G GVA L+  SWMY+Y  G HPPG+++ D+A++R+   A  +K+ A+
Sbjct:   65 PVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQ 139          
BLAST of DC887789 vs. ExPASy Swiss-Prot
Match: OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = -2
Query:  275 PLLILSSPIWVPIGTILFIAVAGFLSVCGFGVAVLAGLSWMYRYFNGMHPPGSNRFDYARSRIYDTASHVKDYAREYG 508
            PLL++ SPI VP    + + + GFLS  GFG+A +   SW+Y+Y  G HP GS++ D AR ++   A  +KD A+ YG
Sbjct:   76 PLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYYG 153          
BLAST of DC887789 vs. ExPASy Swiss-Prot
Match: OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = -2
Query:  275 PLLILSSPIWVPIGTILFIAVAGFLSVCGFGVAVLAGLSWMYRYFNGMHPPGSNRFDYARSRIYDTASHVKDYAREYG 508
            PLL++ SPI VP    + + + GFLS  GFG+A +   SW+Y+Y  G HP GS++ D AR ++   A  +KD A+ YG
Sbjct:   90 PLLVIFSPILVPALITVAMLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYYG 167          
BLAST of DC887789 vs. ExPASy Swiss-Prot
Match: OLEO1_MAIZE (Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12
Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = -2
Query:  284 PLLILSSPIWVPIGTILFIAVAGFLSVCGFGVAVLAGLSWMYRYFNGMHPPGSNRFDYARSRIYDTASHVKDYAR 508
            P+L++ SP+ VP    L +  AGF++  G GVA L+  SWMY+Y  G HPP +++ D+A++R+   A  VKD A+
Sbjct:   73 PVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQ 147          
BLAST of DC887789 vs. ExPASy Swiss-Prot
Match: OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = -2
Query:  275 PLLILSSPIWVPIGTILFIAVAGFLSVCGFGVAVLAGLSWMYRYFNGMHPPGSNRFDYARSRIYDTASHVKDYAREYG 508
            PLL++ SPI VP    + + + GFLS  GFG+A +   SW+Y+Y  G HP GS++ D AR ++      +KD A+ YG
Sbjct:   78 PLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQYYG 155          
BLAST of DC887789 vs. ExPASy Swiss-Prot
Match: OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = -2
Query:  275 PLLILSSPIWVPIGTILFIAVAGFLSVCGFGVAVLAGLSWMYRYFNGMHPPGSNRFDYARSRIYDTASHVKDYAREYG 508
            PLL++ SP+ VP    + +   GFL+  GFGVA +  LSW+Y+Y  G  PPG+++ D AR ++   A  +KD A ++G
Sbjct:   59 PLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAGKARDIKDRAEQFG 136          
BLAST of DC887789 vs. ExPASy Swiss-Prot
Match: OLE16_BROSE (Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12
Identity = 30/75 (40.00%), Postives = 50/75 (66.67%), Query Frame = -2
Query:  284 PLLILSSPIWVPIGTILFIAVAGFLSVCGFGVAVLAGLSWMYRYFNGMHPPGSNRFDYARSRIYDTASHVKDYAR 508
            P+L++ SP+ VP    + +  AGF++  G GVA ++  SWMY+Y  G HPPG+++ D+A++R+   A  +KD A+
Sbjct:   84 PVLVIFSPVLVPAAISMALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158          
BLAST of DC887789 vs. ExPASy Swiss-Prot
Match: OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.352e-11
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = -2
Query:  275 PLLILSSPIWVPIGTILFIAVAGFLSVCGFGVAVLAGLSWMYRYFNGMHPPGSNRFDYARSRIYDTASHVKDYAREYG 508
            PLL++ SPI VP    + + + GFLS   FG+A +   SW+Y+Y  G HP GS++ D AR ++   A  +KD A  YG
Sbjct:   78 PLLVIFSPILVPALITVALLITGFLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRAYYYG 155          
The following BLAST results are available for this feature:
BLAST of DC887789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
OLEO1_ORYSJ1.223e-1241.33Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=... [more]
OLEO1_ARATH1.223e-1243.59Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25... [more]
OLEO3_BRANA1.597e-1243.59Oleosin Bn-III OS=Brassica napus PE=2 SV=1[more]
OLEO1_MAIZE1.597e-1242.67Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2[more]
OLEO2_BRANA4.646e-1242.31Major oleosin NAP-II (Fragment) OS=Brassica napus ... [more]
OLEO1_PRUDU4.646e-1241.03Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1[more]
OLE16_BROSE6.068e-1240.00Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 S... [more]
OLEO5_BRANA1.352e-1142.31Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=... [more]
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Properties
Property NameValue
Genbank descriptionDC887789 EIC Citrus sinensis cDNA clone EIC0882 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887789 ID=DC887789; Name=DC887789; organism=Citrus sinensis; type=EST; length=719bp
AGTAGAGAATTATATTCATTTTACTTCTTTTTTCTTCAAACCAAGCACAA
AATTGAGGAATCATTCAAGTCACAAATTTTCACACAAAGTAAAAAGGCCT
ATCAATAAAAGGAAAAGCCAATTAGCCAAAGGATGAAACAACCAAAATTC
CACCGTCAACAAATGAACAAACAAAACAAAACCAAACCCGGTTCATCACA
TAGTCCAAACCAGCCGGTCCAAATTAACCTCATGCACCAGGAGCTGCATC
CTTGACTTTACTCTGCAAATACCCACCATACTCCCTAGCATAGTCCTTCA
CATGACTGGCAGTGTCATAAATCCGGCTCCTCGCGTAATCAAACCGGTTC
GAACCGGGCGGGTGCATTCCGTTAAAGTACCTGTACATCCAAGACAAACC
GGCGAGGACCGCGACGCCGAACCCACAAACGGATAAGAACCCAGCAACCG
CTATGAAGAGAATTGTTCCAATGGGGACCCAAATGGGGCTAGAGAGTATA
AGCAACGGCGCGAAGAAGATCAGGCCGAGGATTGTTGCGGTGACGGTCAA
GCCGATGAGGAGAAGAAGAATCGAACCGGATACGAAAAGGGTTAAAAAAC
CAATGAGTTGGCTCGAGTTCGGTGCATGGGTTTGAAACCTGCGTAGCAAG
GAGTTGCTGCTGTTGATGTTTGAATTGTTTAGTCTCGAGGAANGTCTCTG
GTGGATGGTANGGTTTCGA
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