CN185310

Overview
NameCN185310
Unique NameCN185310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5386 contig Csv1_Contig5386:45..627. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 1.324e-95
Identity = 163/182 (89.56%), Postives = 174/182 (95.60%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            MS TAGQVIRC+AAVAWEAGKPLVIEEVEVAPPQ NEVR+KILFTSLCHTDVYFWEAKGQ PLFPRI+GHEAGGIVESVGEGVTDL+ GDHVLPVFTGECK+C HC SEESNMCDLL INTDRGVM++DG+SRFSIKGKPIYHFVGTSTFSEYTV HVGC+AKINP+APLDKVC+LSCGIST
Sbjct:    1 MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQNPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGIST 182          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 4.259e-94
Identity = 164/181 (90.61%), Postives = 170/181 (93.92%), Query Frame = 1
Query:   40 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            S TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQK EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDL+PGDHVLPVFTGEC++C HC SEESNMCDLL INTDRGVMI+DGQ+RFS  GKPIYHFVGTSTFSEYTV H GCV KI+P APLDKVCVLSCGIST
Sbjct:    3 SNTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGIST 183          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 342.428 bits (877), Expect = 9.488e-94
Identity = 163/179 (91.06%), Postives = 168/179 (93.85%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAVAWEA KPLVIEEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQTP+FPRIFGHEAGGIVESVGEGVTDL PGDHVLPVFTGECKEC HC S ESNMCDLL INTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKVCVLSCGIST
Sbjct:    3 TAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGIST 181          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 342.428 bits (877), Expect = 9.488e-94
Identity = 163/179 (91.06%), Postives = 168/179 (93.85%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAVAWEA KPLVIEEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQTP+FPRIFGHEAGGIVESVGEGVTDL PGDHVLPVFTGECKEC HC S ESNMCDLL INTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINPAAPLDKVCVLSCGIST
Sbjct:    3 TAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGIST 181          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 1.618e-93
Identity = 162/182 (89.01%), Postives = 168/182 (92.31%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LL INTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGIST
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGIST 182          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 1.618e-93
Identity = 162/182 (89.01%), Postives = 168/182 (92.31%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LL INTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGIST
Sbjct:    1 MSTTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGIST 182          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_TRIRP (Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH1 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.114e-93
Identity = 160/182 (87.91%), Postives = 169/182 (92.86%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            MS TAGQVI+C+AAVAWEAGKPLVIEEVEVAPPQ  EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVT L+PGDH LPVFTGEC ECPHC SEESNMC+LL INTDRGVMIND +SRFSIKG+P++HFVGTSTFSEYTV H GCVAKINP APLDKVC+LSCGI T
Sbjct:    1 MSNTAGQVIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCNLLRINTDRGVMINDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICT 182          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.114e-93
Identity = 162/182 (89.01%), Postives = 168/182 (92.31%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            MS T GQVIRCKAAVAWEAGKPLV+EEV+VAPPQK EVRLKIL+TSLCHTDVYFWEAKGQ P+FPRI GHEA GIVESVGEGVT+L PGDHVLPVFTGECK+C HC SEESNMC LL INTDRGVMINDGQSRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGIST
Sbjct:    1 MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGIST 182          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 3.605e-93
Identity = 158/182 (86.81%), Postives = 168/182 (92.31%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            MS T GQ+I+C+AAVAWEAGKPLVIEEVEVAPPQ  EVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVT L+PGDH LPVFTGEC ECPHC SEESNMCDLL INTDRGVM+ND +SRFSIKG+P++HFVGTSTFSEYTV H GCVAKINP APLDKVC+LSCGI T
Sbjct:    1 MSNTVGQIIKCRAAVAWEAGKPLVIEEVEVAPPQAGEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTHLKPGDHALPVFTGECGECPHCKSEESNMCDLLRINTDRGVMLNDNKSRFSIKGQPVHHFVGTSTFSEYTVVHAGCVAKINPDAPLDKVCILSCGICT 182          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 8.032e-93
Identity = 160/179 (89.39%), Postives = 167/179 (93.30%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAVAWEAGKPL +EEVEVAPPQ  EVR+KILFTSLCHTDVYFWEAKGQ P+FPRIFGHEAGGIVESVGEGVTD+ PGDHVLPVFTGECKECPHC S ESNMCDLL INTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGIST
Sbjct:    3 TAGKVIKCKAAVAWEAGKPLTMEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQIPMFPRIFGHEAGGIVESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTDRGVMIGDGKSRFSIGGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGIST 181          
The following BLAST results are available for this feature:
BLAST of CN185310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
ADH_MALDO1.324e-9589.56Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH1_PETHY4.259e-9490.61Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_ORYSJ9.488e-9491.06Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI9.488e-9491.06Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH3_SOLTU1.618e-9389.01Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU1.618e-9389.01Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH1_TRIRP2.114e-9387.91Alcohol dehydrogenase 1 OS=Trifolium repens GN=ADH... [more]
ADH1_SOLTU2.114e-9389.01Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH1_PEA3.605e-9386.81Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH1_HORVU8.032e-9389.39Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185310 ID=CN185310; Name=CN185310; organism=Citrus sinensis; type=EST; length=583bp
AGGCAGGTGTTGAGAGTATCATCATTCATCATCAATATGTCTGGCACAGC
TGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGGGGAAGC
CACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAATGAAGTT
CGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTACTTCTG
GGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTCACGAAG
CTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTCCAACCA
GGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGGAATGTCCTCA
CTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCACGATCAATACTG
ACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTCGATTAAGGGG
AAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATACACTGT
TACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTCTTGACA
AAGTTTGTGTGCTTAGCTGTGGAATCTCCACAG
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