DC887773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.320e-27 Identity = 56/59 (94.92%), Postives = 58/59 (98.31%), Query Frame = -1 Query: 165 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 341 HSTINNLAIGRSVDET+RTLQALQYVQ+NPDEVCPAGWKPGDKSMKPDPK SKEYFAAI Sbjct: 203 HSTINNLAIGRSVDETMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYFAAI 261
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana GN=At5g06290 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 3.320e-27 Identity = 55/59 (93.22%), Postives = 58/59 (98.31%), Query Frame = -1 Query: 165 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 341 HSTINNL IGRSVDET+RTLQALQYVQENPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI Sbjct: 213 HSTINNLGIGRSVDETMRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 271
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 4.336e-27 Identity = 54/59 (91.53%), Postives = 58/59 (98.31%), Query Frame = -1 Query: 165 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 341 HSTINNL IGRSVDET+RTLQALQY+QENPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI Sbjct: 208 HSTINNLGIGRSVDETMRTLQALQYIQENPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 266
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea GN=BAS1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.861e-24 Identity = 52/59 (88.14%), Postives = 55/59 (93.22%), Query Frame = -1 Query: 165 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 341 HSTINNL IGRSVDET+RTLQALQY NPDEVCPAGWKPG+KSMKPDPKLSKEYF+AI Sbjct: 208 HSTINNLGIGRSVDETMRTLQALQYTG-NPDEVCPAGWKPGEKSMKPDPKLSKEYFSAI 265
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: BAS1_HORVU (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Hordeum vulgare GN=BAS1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 7.654e-24 Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = -1 Query: 165 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 341 HSTINNL IGRSVDETLRTLQALQYV++ PDEVCPAGWKPG+KSMKPDPK SKEYFAAI Sbjct: 153 HSTINNLGIGRSVDETLRTLQALQYVKK-PDEVCPAGWKPGEKSMKPDPKGSKEYFAAI 210
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: BAS1_WHEAT (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Triticum aestivum GN=TSA PE=1 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.227e-23 Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = -1 Query: 165 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI 341 HSTINNL IGRSVDETLRTL+ALQYV++ PDEVCPAGWKPG+KSMKPDPK SKEYFAAI Sbjct: 153 HSTINNLGIGRSVDETLRTLRALQYVKK-PDEVCPAGWKPGEKSMKPDPKGSKEYFAAI 210
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: YCF42_PORYE (Putative peroxiredoxin ycf42 OS=Porphyra yezoensis GN=ycf42 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.010e-20 Identity = 44/58 (75.86%), Postives = 49/58 (84.48%), Query Frame = -1 Query: 168 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 341 +STINNL GRSV+ETLR LQA+QYVQ +PDEVCPA WKPGDK+M PDP SK YFAA Sbjct: 141 YSTINNLEFGRSVEETLRVLQAIQYVQSHPDEVCPANWKPGDKTMNPDPIKSKNYFAA 198
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: YCF42_PORPU (Putative peroxiredoxin ycf42 OS=Porphyra purpurea GN=ycf42 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.144e-19 Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = -1 Query: 168 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAA 341 +ST+NNL GRSV+ETLR LQA+QYVQ +PDEVCPA WKPGD++M PDP SK YFAA Sbjct: 141 YSTVNNLEFGRSVEETLRVLQAIQYVQAHPDEVCPANWKPGDRTMNPDPIKSKNYFAA 198
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: Y755_SYNY3 (Putative peroxiredoxin sll0755 OS=Synechocystis sp. (strain PCC 6803) GN=sll0755 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.709e-15 Identity = 34/61 (55.74%), Postives = 49/61 (80.33%), Query Frame = -1 Query: 159 HSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFAAI*E 341 ++T+NNL+ GRSVDETLR L+A+++VQ +P+EVCP W+ GDK+M PDP+ +K YF + E Sbjct: 139 YATVNNLSFGRSVDETLRVLKAIRHVQSHPNEVCPVDWQEGDKTMIPDPEKAKTYFETVAE 199
BLAST of DC887773 vs. ExPASy Swiss-Prot
Match: PRDX1_CHICK (Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.729e-13 Identity = 34/55 (61.82%), Postives = 44/55 (80.00%), Query Frame = -1 Query: 171 TINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDKSMKPDPKLSKEYFA 335 TIN+L +GRSVDETLR +QA Q+ ++ EVCPAGWKPG ++KPD + SKEYF+ Sbjct: 143 TINDLPVGRSVDETLRLVQAFQFTDKH-GEVCPAGWKPGSDTIKPDVQKSKEYFS 196 The following BLAST results are available for this feature:
BLAST of DC887773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887773 ID=DC887773; Name=DC887773; organism=Citrus sinensis; type=EST; length=341bpback to top |