DC887768
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.653e-22 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 +GDI +SKIINDRETGRSRGFGFVTF+DEKSMRDAIEGMNGQ LDGRNITVNEAQ Sbjct: 29 FGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.683e-22 Identity = 48/55 (87.27%), Postives = 55/55 (100.00%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 YG++L+SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 31 YGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.810e-22 Identity = 47/55 (85.45%), Postives = 55/55 (100.00%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 YGD+++SKIINDRETGRSRGFGFVTF+DEK+M+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 31 YGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.118e-21 Identity = 46/55 (83.64%), Postives = 55/55 (100.00%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 31 FGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.711e-19 Identity = 44/55 (80.00%), Postives = 52/55 (94.55%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 +GD+++SKIINDRE+GRSRGFGFVTF+DEK+MRDAIE MNG+ LDGR ITVNEAQ Sbjct: 29 FGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.711e-19 Identity = 43/55 (78.18%), Postives = 52/55 (94.55%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAI+ MNG+ LDGR ITVNEAQ Sbjct: 29 FGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19 Identity = 43/55 (78.18%), Postives = 50/55 (90.91%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 YGD+++SKII DRETGRSRGFGFVTF +++MR AIE MNGQ+LDGRNITVNEAQ Sbjct: 29 YGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.470e-18 Identity = 43/55 (78.18%), Postives = 48/55 (87.27%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 YG+IL+SK+I DRETGRSRGFGFVTF E SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 31 YGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.226e-18 Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 YG++LESKII DRET RSRGFGFVTF E++MR AIEGMNG+ LDGRNITVNEAQ Sbjct: 10 YGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64
BLAST of DC887768 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.091e-17 Identity = 40/55 (72.73%), Postives = 48/55 (87.27%), Query Frame = -2 Query: 378 YGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 542 +G +++SK+I DRETGRSRGFGFVTF E+SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 31 FGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85 The following BLAST results are available for this feature:
BLAST of DC887768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887768 ID=DC887768; Name=DC887768; organism=Citrus sinensis; type=EST; length=543bpback to top |