DC887766

Overview
NameDC887766
Unique NameDC887766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length576
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C44_ORYSJ (Probable protein phosphatase 2C 44 OS=Oryza sativa subsp. japonica GN=Os04g0609600 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.762e-42
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = -3
Query:  302 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIRF 574
            VNGQLAVARAFGDQSLKAHLSSEPDVRHVPI+ SIEF+ILASDGLWKVMKNQEAVDLVK IKDPQAAAKRLTTEALARKSKDDISCIVIRF
Sbjct:  229 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWKVMKNQEAVDLVKSIKDPQAAAKRLTTEALARKSKDDISCIVIRF 319          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.698e-31
Identity = 68/91 (74.73%), Postives = 77/91 (84.62%), Query Frame = -3
Query:  302 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIRF 574
            V+GQLAVARAFGD+SLK HLSSEPDV   PID + +FLILASDGLWKVM NQEAVD +K  KD QAAAK LT +A+ RKSKDDISCIV++F
Sbjct:  198 VDGQLAVARAFGDRSLKKHLSSEPDVVEEPIDENTDFLILASDGLWKVMSNQEAVDEIKDFKDAQAAAKHLTEQAVNRKSKDDISCIVVKF 288          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.217e-31
Identity = 64/91 (70.33%), Postives = 76/91 (83.52%), Query Frame = -3
Query:  302 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIRF 574
            V+GQLAVARAFGD+SLK HLSSEPD+ H  ID   EF++ ASDG+WKV+ NQEAVD +K IKDP AAAK L  EA++RKSKDDISCIV++F
Sbjct:  192 VDGQLAVARAFGDKSLKLHLSSEPDITHQTIDDHTEFILFASDGIWKVLSNQEAVDAIKSIKDPHAAAKHLIEEAISRKSKDDISCIVVKF 282          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.589e-29
Identity = 58/91 (63.74%), Postives = 75/91 (82.42%), Query Frame = -3
Query:  302 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIRF 574
            VNGQLAV+RAFGD+ LK HLSSEPD++   +D   + L+LASDG+WKVM N+EA+++ + +KDPQ AAK LT EAL R+SKDDISC+V+RF
Sbjct:  190 VNGQLAVSRAFGDKGLKTHLSSEPDIKEATVDSQTDVLLLASDGIWKVMTNEEAMEIARRVKDPQKAAKELTAEALRRESKDDISCVVVRF 280          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.711e-29
Identity = 63/90 (70.00%), Postives = 73/90 (81.11%), Query Frame = -3
Query:  305 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIR 574
            VNGQLAV+RAFGD+SLK HL S+PDV+   ID   + L+LASDGLWKVM NQEA+D+ + IKDP  AAK LTTEAL R SKDDISCIV+R
Sbjct:  191 VNGQLAVSRAFGDKSLKTHLRSDPDVKDSSIDDHTDVLVLASDGLWKVMANQEAIDIARRIKDPLKAAKELTTEALRRDSKDDISCIVVR 280          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 4.623e-29
Identity = 62/88 (70.45%), Postives = 74/88 (84.09%), Query Frame = -3
Query:  311 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIV 574
            V+GQLAVARAFGD+SLK HLSS+PD+R   ID   EF++ ASDG+WKVM NQEAVDL+K IKDPQAAAK L  EA++++S DDISCIV
Sbjct:  188 VDGQLAVARAFGDKSLKIHLSSDPDIRDENIDHETEFILFASDGVWKVMSNQEAVDLIKSIKDPQAAAKELIEEAVSKQSTDDISCIV 275          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 2.295e-28
Identity = 62/91 (68.13%), Postives = 74/91 (81.32%), Query Frame = -3
Query:  302 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIRF 574
            V GQLAV+RAFGD++LK+ L SEPD++   ID + E L+LASDGLWKVM NQE VD+ K  KDPQAAAK+LT EAL R SKDDISC+V+RF
Sbjct:  192 VCGQLAVSRAFGDRNLKSLLKSEPDIKVEDIDYTAELLVLASDGLWKVMNNQEVVDVAKRFKDPQAAAKQLTAEALKRDSKDDISCVVVRF 282          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.112e-28
Identity = 65/91 (71.43%), Postives = 73/91 (80.22%), Query Frame = -3
Query:  302 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIRF 574
            V+GQLAVARAFGD+SLK HLSSEP V    ID   EFLILASDGLWKVM NQEAVD +K IKD +AAAK L  EA+ARKS DDIS +V++F
Sbjct:  198 VDGQLAVARAFGDKSLKMHLSSEPYVTVEIIDDDAEFLILASDGLWKVMSNQEAVDSIKGIKDAKAAAKHLAEEAVARKSSDDISVVVVKF 288          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.652e-27
Identity = 58/91 (63.74%), Postives = 75/91 (82.42%), Query Frame = -3
Query:  302 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIRF 574
            VNG LAV+R FGD++LKA+L+SEP+++ V ID   +FLILASDG+ KVM NQEAVD+ K +KDP+ AA+++  EAL R SKDDISCIV+RF
Sbjct:  192 VNGLLAVSRVFGDKNLKAYLNSEPEIKDVTIDSHTDFLILASDGISKVMSNQEAVDVAKKLKDPKEAARQVVAEALKRNSKDDISCIVVRF 282          
BLAST of DC887766 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.791e-23
Identity = 50/91 (54.95%), Postives = 72/91 (79.12%), Query Frame = -3
Query:  302 VNGQLAVARAFGDQSLKAHLSSEPDVRHVPIDPSIEFLILASDGLWKVMKNQEAVDLVKPIKDPQAAAKRLTTEALARKSKDDISCIVIRF 574
            V G LAV+RAFGD+ LK ++ ++P+++   +D S+EFLILASDGLW V+ N+EAVD+V+PI+DP+ AAKRL  EA  R S D+I+ +++RF
Sbjct:  238 VGGVLAVSRAFGDKLLKQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVRPIQDPEQAAKRLLQEAYQRGSADNITVVIVRF 328          
The following BLAST results are available for this feature:
BLAST of DC887766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
P2C44_ORYSJ4.762e-4295.60Probable protein phosphatase 2C 44 OS=Oryza sativa... [more]
P2C62_ORYSJ1.698e-3174.73Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C58_ARATH2.217e-3170.33Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C09_ARATH1.589e-2963.74Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C10_ARATH2.711e-2970.00Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C20_ARATH4.623e-2970.45Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]
P2C41_ORYSJ2.295e-2868.13Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
P2C39_ARATH5.112e-2871.43Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
P2C17_ARATH5.652e-2763.74Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C10_ORYSJ3.791e-2354.95Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionDC887766 EIC Citrus sinensis cDNA clone EIC0846 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887766 ID=DC887766; Name=DC887766; organism=Citrus sinensis; type=EST; length=576bp
ACTAATGCACAGGGTACCCTCATTAATCACACCCCGCCCCCACAACAATT
AAACGCAAGCAAGTGGCTGATACGATTACATAGCAAATTTTCCTCCCTGT
GGCACCAGAAAAACAAGAAAAAGGGAAAAAAAAAAAAGCATCACACTACC
ATTTATGTCGACTGCTCTCAATACAGAAAGCTACTACATACATAACAGTT
TTCTGACTCAAATTCTGCTACCATTTTCATCTTCTAGACAAATCATTCAG
CCAGCAGCAAGTTTATGAGGTAATCCCTGTGAGCTCTTGGCATCATTGTC
CAAAACGAATAACAATGCAAGATATGTCATCTTTACTCTTTCTTGCCAAT
GCTTCAGTTGTTAGTCGTTTCGCTGCTGCCTGAGGATCTTTTATGGGTTT
CACAAGATCAACTGCCTCTTGATTCTTCATAACCTTCCACAATCCATCAC
TTGCCAATATTAAAAATTCGATACTTGGGTCTATTGGCACATGTCTTACA
TCAGGCTCTGAACTTAAATGTGCTTTAAGACTTTGATCCCCGAATGCACG
TGCAACAGCAAGTTGACCATTAACTC
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