DC887762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887762 vs. ExPASy Swiss-Prot
Match: PHF5_ARATH (Uncharacterized protein At1g07170/At2g30000 OS=Arabidopsis thaliana GN=At1g07170 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 1.682e-63 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = -3 Query: 239 MAKHHXDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 568 MAKHH DLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 110
BLAST of DC887762 vs. ExPASy Swiss-Prot
Match: PHF5A_RAT (PHD finger-like domain-containing protein 5A OS=Rattus norvegicus GN=Phf5a PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.925e-59 Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = -3 Query: 239 MAKHHXDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 568 MAKHH DLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of DC887762 vs. ExPASy Swiss-Prot
Match: PHF5A_MOUSE (PHD finger-like domain-containing protein 5A OS=Mus musculus GN=Phf5a PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.925e-59 Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = -3 Query: 239 MAKHHXDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 568 MAKHH DLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of DC887762 vs. ExPASy Swiss-Prot
Match: PHF5A_HUMAN (PHD finger-like domain-containing protein 5A OS=Homo sapiens GN=PHF5A PE=1 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.925e-59 Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = -3 Query: 239 MAKHHXDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKKR 568 MAKHH DLI CRKQ G+AIGRLCEKCDGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCKECT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFKKR Sbjct: 1 MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
BLAST of DC887762 vs. ExPASy Swiss-Prot
Match: PHF5_DROME (Uncharacterized protein CG9548 OS=Drosophila melanogaster GN=CG9548 PE=3 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 2.353e-57 Identity = 97/109 (88.99%), Postives = 103/109 (94.50%), Query Frame = -3 Query: 242 MAKHHXDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKYGFKK 568 MAKHH DLI CRKQPG+AIGRLCEK DGKCVICDSYVRPCTLVR+CDECNYGS+QGRCVICGG G+SDAYYCK CT QEKDRDGCPKIVNLGS+KTDLFYERKKYGFK+ Sbjct: 1 MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKSCTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKQ 109
BLAST of DC887762 vs. ExPASy Swiss-Prot
Match: INI1_SCHPO (Pre-mRNA-splicing factor ini1 OS=Schizosaccharomyces pombe GN=ini1 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.749e-44 Identity = 71/105 (67.62%), Postives = 90/105 (85.71%), Query Frame = -3 Query: 254 MAKHHXDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICGGVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKKY 568 M+KHH DL++CR+QPGI +G+LCE+CD KC ICDS+VRP TLVR+CDEC +GS Q RC+ICG G+SD YYC ECT+ E DRDGCP+++NLGS++TD FYERKK+ Sbjct: 1 MSKHHPDLVLCRRQPGITVGKLCERCDEKCPICDSHVRPTTLVRICDECAFGSSQDRCIICGAPGVSDCYYCSECTRMEYDRDGCPRVINLGSSRTDWFYERKKF 105
BLAST of DC887762 vs. ExPASy Swiss-Prot
Match: RDS3_YEAST (Pre-mRNA-splicing factor RDS3 OS=Saccharomyces cerevisiae GN=RDS3 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.094e-33 Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = -3 Query: 257 MAKHHXDLIMCRKQPGIAIGRLCEKCDGKCVICDSYVRPCTLVRVCDECNYGSFQGRCVICG-GVGISDAYYCKECTQQEKDRDGCPKIVNLGSAKTDLFYERKK 568 M++H DLIMC KQPG+ G LCEKCDGKC ICDSYVRP VRVC+ C++G C+IC VG++DA+YC EC + KD+DGCP+I+NLGS + D +E+KK Sbjct: 1 MSRHQFDLIMCLKQPGVQTGLLCEKCDGKCPICDSYVRPKRKVRVCENCSFGKQAKNCIICNLNVGVNDAFYCWECCRLGKDKDGCPRILNLGSNRLDRHFEKKK 105 The following BLAST results are available for this feature:
BLAST of DC887762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887762 ID=DC887762; Name=DC887762; organism=Citrus sinensis; type=EST; length=576bpback to top |