DC887727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: ZNRF3_HUMAN (Zinc/RING finger protein 3 OS=Homo sapiens GN=ZNRF3 PE=2 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 4.531e-13 Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = -1 Query: 45 LTQEALDCLHVEIFNSFAISS-EGE-------ASKTSLDCSICLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIV 275 L +AL+ + FNS + EG +S ++ DC+ICLE + DG+EL +PC HRFH C+DPW+ CP+CR NI+ Sbjct: 254 LAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 338
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: ZNRF3_MOUSE (Zinc/RING finger protein 3 OS=Mus musculus GN=Znrf3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 7.728e-13 Identity = 35/85 (41.18%), Postives = 50/85 (58.82%), Query Frame = -1 Query: 45 LTQEALDCLHVEIFNSFAISS-EGE-------ASKTSLDCSICLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIV 275 L +AL+ + FNS + EG +S ++ DC+ICLE + DG+EL +PC HRFH C+DPW+ CP+CR NI+ Sbjct: 251 LAVQALEKMETRKFNSKSKGRREGSCGALDTLSSGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 335
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: ATL5I_ARATH (RING-H2 finger protein ATL5I OS=Arabidopsis thaliana GN=ATL5I PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = -1 Query: 57 SAGWSAVSSPFSELMTSQTERLQLVQQKRKKPPGLTQEALDCLHV----EIFNSFAISSEGEASKTSLDCSICLESFTDGDELICLP-CKHRFHSDCLDPWVRSCGDCPYCR 377 SA S+ S+ F E+ TS + QL Q GL Q +D L V EI S A++ DC++CL F++ D+L LP C H FH +C+D W++S CP CR Sbjct: 74 SATASSRSNRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: RF12A_XENLA (E3 ubiquitin-protein ligase rnf12-A OS=Xenopus laevis GN=rnf12-A PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.009e-12 Identity = 33/86 (38.37%), Postives = 50/86 (58.14%), Query Frame = -1 Query: 30 KPPGLTQEALDCLHVEIFNSFAISSEGEASKTSLDCSICLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVNSDK 287 +P GLT+E +D L F E +A KT CS+C+ +T+G++L LPC H +H C+D W+ CP CRR ++V S++ Sbjct: 542 QPRGLTKEQIDNLSTRNFG------ENDALKT---CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVASNR 618
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: RNF12_XENTR (E3 ubiquitin-protein ligase rnf12 OS=Xenopus tropicalis GN=rnf12 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.457e-11 Identity = 32/86 (37.21%), Postives = 49/86 (56.98%), Query Frame = -1 Query: 30 KPPGLTQEALDCLHVEIFNSFAISSEGEASKTSLDCSICLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVNSDK 287 +P GLT+E +D L F E +A KT CS+C+ +T+G++L LPC H +H C+D W+ CP CRR ++V ++ Sbjct: 559 QPRGLTKEQIDNLSTRNFG------ENDALKT---CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVAGNR 635
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: RNF12_HUMAN (E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.457e-11 Identity = 31/86 (36.05%), Postives = 50/86 (58.14%), Query Frame = -1 Query: 30 KPPGLTQEALDCLHVEIFNSFAISSEGEASKTSLDCSICLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVNSDK 287 +P GLT+E +D L + F E +A KT CS+C+ +T+G++L LPC H +H C+D W+ CP CRR ++ + ++ Sbjct: 544 QPRGLTKEQIDNLAMRSFG------ENDALKT---CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNR 620
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: RNF12_MOUSE (E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.904e-11 Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = -1 Query: 30 LVQQKRKKPPGLTQEALDCLHVEIFNSFAISSEGEASKTSLDCSICLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVNSDK 308 L + +P GLT+E +D L + F E +A KT CS+C+ +T+G++L LPC H +H C+D W+ CP CRR ++ + ++ Sbjct: 513 LNEDDEDQPRGLTKEQIDNLAMRSFG------ENDALKT---CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSSGNR 596
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: ATL3I_ARATH (RING-H2 finger protein ATL3I OS=Arabidopsis thaliana GN=ATL3I PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.904e-11 Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = -1 Query: 48 GLTQEALDCLHVEIFNSFAISSEGEASKTSLDCSICLESFTDGDELICLP-CKHRFHSDCLDPWVRSCGDCPYCRRNI 278 GL Q A+D L V ++ + IS E DC++CL F+D D+L LP C H FH C+D W+ S CP CRR++ Sbjct: 180 GLDQTAIDALPVFLYGNVTISLE-----QPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: RF12B_XENLA (E3 ubiquitin-protein ligase rnf12-B OS=Xenopus laevis GN=rnf12-B PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11 Identity = 31/86 (36.05%), Postives = 49/86 (56.98%), Query Frame = -1 Query: 30 KPPGLTQEALDCLHVEIFNSFAISSEGEASKTSLDCSICLESFTDGDELICLPCKHRFHSDCLDPWVRSCGDCPYCRRNIVVNSDK 287 +P GLT+E +D L + E +A KT CS+C+ +T+G++L LPC H +H C+D W+ CP CRR ++V ++ Sbjct: 677 QPRGLTKEQIDNLSTRNYG------ENDALKT---CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVAGNR 753
BLAST of DC887727 vs. ExPASy Swiss-Prot
Match: ATL1D_ARATH (RING-H2 finger protein ATL1D OS=Arabidopsis thaliana GN=ATL1D PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 9.447e-11 Identity = 36/96 (37.50%), Postives = 49/96 (51.04%), Query Frame = -1 Query: 57 ELMTSQTERLQLVQQKRKKPPGLTQEALDCLHVEIFNSFAISSEGEASKTSLDCSICLESFTDGDELICLP-CKHRFHSDCLDPWVRSCGDCPYCR 341 E S T + QL Q GL Q +D L V ++ E + +K DC++CL F++ D+L LP C H FH DC+D W+ S CP CR Sbjct: 97 EFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYK------EIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186 The following BLAST results are available for this feature:
BLAST of DC887727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887727 ID=DC887727; Name=DC887727; organism=Citrus sinensis; type=EST; length=458bpback to top |