DC887700
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_ARATH (10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 6.660e-38 Identity = 71/97 (73.20%), Postives = 86/97 (88.66%), Query Frame = -3 Query: 95 MAKRLIPTLNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 385 M KRLIPT NR+LV++++ P+KT +GILLPEKSSKLNSGKVIAVGPG+RDK+G IPV+ KEGDTVLLP YGG VKLGE +YHL+RDE++LGTLH+ Sbjct: 1 MMKRLIPTFNRILVQRVIQPAKTESGILLPEKSSKLNSGKVIAVGPGSRDKDGKLIPVSVKEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTLHE 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BRANA (10 kDa chaperonin OS=Brassica napus PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.136e-37 Identity = 71/97 (73.20%), Postives = 86/97 (88.66%), Query Frame = -3 Query: 95 MAKRLIPTLNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 385 M KRLIPT NR+LV+ ++ P+KT +GILLPEK+SKLNSGKVIAVGPG+RDK+G IPV+ KEGDTVLLP YGG VKLGEK+YHL+RDE++LGTLH+ Sbjct: 1 MMKRLIPTFNRILVQGVIQPAKTESGILLPEKASKLNSGKVIAVGPGSRDKDGKLIPVSVKEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTLHE 97
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_SCHPO (10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces pombe GN=hsp10 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.263e-20 Identity = 47/97 (48.45%), Postives = 68/97 (70.10%), Query Frame = -3 Query: 95 AKRLIPTLNRVLVEKIVPPSKTNAGILLPEKS-SKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 382 AK ++P L+R+LV++I +KT +GI LPEKS KL+ G+VI+VG G +KEG + GD VLLP YGG ++K+GE++Y LYRD E+L + + Sbjct: 8 AKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEGKLAQPSVAVGDRVLLPAYGGSNIKVGEEEYSLYRDHELLAIIKE 104
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_ORYLA (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes GN=hspe1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.655e-18 Identity = 44/96 (45.83%), Postives = 65/96 (67.71%), Query Frame = -3 Query: 95 KRLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 379 ++ +P +RVLVE+++ + T GI+LPEKS K+ V+AVGPG+ +++G P++ K G+ VLLP YGG V L +KDY L+RD +ILG D Sbjct: 4 RKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVKVGEKVLLPQYGGTKVVLEDKDYFLFRDADILGKYVD 99
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_MOUSE (10 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspe1 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 1.306e-17 Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = -3 Query: 95 KRLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 379 ++ +P +RVLVE+ + T GI+LPEKS K+ V+AVG G + K G PV+ K GD VLLP YGG V L +KDY L+RD +ILG D Sbjct: 7 RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKYVD 102
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_HUMAN (10 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPE1 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.909e-17 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = -3 Query: 95 KRLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 379 ++ +P +RVLVE+ + T GI+LPEKS K+ V+AVG G++ K G PV+ K GD VLLP YGG V L +KDY L+RD +ILG D Sbjct: 7 RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 102
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_BOVIN (10 kDa heat shock protein, mitochondrial OS=Bos taurus GN=HSPE1 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 2.909e-17 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = -3 Query: 95 KRLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 379 ++ +P +RVLVE+ + T GI+LPEKS K+ V+AVG G++ K G PV+ K GD VLLP YGG V L +KDY L+RD +ILG D Sbjct: 7 RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 102
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_RAT (10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus GN=Hspe1 PE=1 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 3.799e-17 Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = -3 Query: 95 KRLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILGTLHD 379 ++ +P +RVLVE+ + T GI+LPEKS K+ V+AVG G + K G PV+ K GD VLLP YGG V L +KDY L+RD +ILG D Sbjct: 7 RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD 102
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_YEAST (10 kDa heat shock protein, mitochondrial OS=Saccharomyces cerevisiae GN=HSP10 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.481e-17 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = -3 Query: 101 AKRLIPTLNRVLVEKIVPPSKTNAGILLPEKS-SKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKD-YHLYRDEEILGTL 382 AK ++P ++RVLV++I +KT +G+ LPEK+ KLN +V+AVGPG D GN + K GD VL+P +GG +KLG D L+RD EIL + Sbjct: 8 AKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANGNKVVPQVKVGDQVLIPQFGGSTIKLGNDDEVILFRDAEILAKI 103
BLAST of DC887700 vs. ExPASy Swiss-Prot
Match: CH10_SCHJA (10 kDa heat shock protein, mitochondrial OS=Schistosoma japonicum GN=SJCHGC01960 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 6.707e-14 Identity = 36/91 (39.56%), Postives = 57/91 (62.64%), Query Frame = -3 Query: 110 KRLIPTLNRVLVEKIVPPSKTNAGILLPEKSS-KLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEIL 379 ++ P +RVLV++ +K+ GI+LPEK+ K+ V+A GPG ++++G +PV GD V LP YGG V L + +Y L+R+ +IL Sbjct: 7 RKFAPLFDRVLVQRFEAETKSKGGIMLPEKAKGKVLEATVVAHGPGVKNEKGEVVPVCVTVGDKVFLPEYGGTKVVLEDTEYFLFRESDIL 97 The following BLAST results are available for this feature:
BLAST of DC887700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887700 ID=DC887700; Name=DC887700; organism=Citrus sinensis; type=EST; length=450bpback to top |