DC887695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20 Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = -3 Query: 322 PNLGLPKSTIASASEDGKVIIWTVA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 546 P++GLP STIAS S+DG+V IWT G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDG+W Sbjct: 222 PSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 3.545e-20 Identity = 44/76 (57.89%), Postives = 57/76 (75.00%), Query Frame = -3 Query: 322 PNLGLPKSTIASASEDGKVIIWTVA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 546 P++GLP STIAS S+DG+V IWT G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDG+W Sbjct: 222 PSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.048e-20 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = -3 Query: 322 PNLGLPKSTIASASEDGKVIIWTVA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 546 P++GLP STIAS S+DG+V +WT G+ W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDG+W Sbjct: 222 PSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 95.1301 bits (235), Expect = 2.298e-19 Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = -3 Query: 322 PNLGLPKSTIASASEDGKVIIWTVA-REGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEW 546 P++GLP STIAS S+DG+V IWT + W K+LH F V+ VSWS+T NILAV+ G+N VTLW+E+VDG+W Sbjct: 222 PSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQW 297
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.945e-18 Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = -3 Query: 304 PNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 546 PN+GLP S IAS S+D VI+WT G W GK L F V+RVSWS+ GNILAV+ G+N VTLW+E VD EW+ ++ V Sbjct: 219 PNIGLPYSKIASCSQDRSVIVWTQDENG-VWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLISHV 298
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_MAGGR (Protein transport protein SEC13 OS=Magnaporthe grisea GN=SEC13 PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = -3 Query: 304 LPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 534 L KS IASAS+D V IWT + W+ +VL +F T V+RVSWSL+GN+LAV+ G+N VTLW+E + GEW V ++ Sbjct: 217 LQKSYIASASQDRTVRIWTSDSSNPGVWQSRVLKEFDTTVWRVSWSLSGNVLAVSSGDNKVTLWKENLKGEWACVNSL 294
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_YARLI (Protein transport protein SEC13 OS=Yarrowia lipolytica GN=SEC13 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.629e-15 Identity = 43/80 (53.75%), Postives = 57/80 (71.25%), Query Frame = -3 Query: 304 LPKSTIASASEDGKVIIWTVAREGDQ-WEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 534 L KS IASAS+D VI+WT +EG+Q W+ K+L D P V++VSWSL+GN+LAV+ G+N VTLW+E + GEW V Sbjct: 219 LSKSYIASASQDKTVIVWT--QEGNQPWKKKLLQDIPFPDVVWKVSWSLSGNVLAVSGGDNKVTLWKENLTGEWESAGVV 296
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14 Identity = 41/78 (52.56%), Postives = 52/78 (66.67%), Query Frame = -3 Query: 304 LPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 534 L KS IASAS+D V IWT A +W+ KVL+ F V+RVSWSL+GN+LA + NN VTLW+E + GEW V + Sbjct: 226 LQKSYIASASQDKTVRIWTSDAANPGEWKCKVLN-FDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENVKTI 302
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_CHAGB (Protein transport protein SEC13 OS=Chaetomium globosum GN=SEC13 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.458e-14 Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = -3 Query: 304 LPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 534 L KS IASASED V IWT QW KVL F V+RVSWSL+GN+LA + G+N VTLW+E + GEW V ++ Sbjct: 212 LQKSYIASASEDRTVRIWTSDPANPQQWNCKVL-GFDAAVWRVSWSLSGNVLAASGGDNKVTLWKENLKGEWECVKSI 288
BLAST of DC887695 vs. ExPASy Swiss-Prot
Match: SEC13_PICPG (Protein transport protein SEC13 OS=Pichia pastoris (strain GS115) GN=SEC13 PE=3 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 3.214e-13 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = -3 Query: 304 LPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 534 L KS IA+AS+D V+IWT + ++WE + L K P +R SWSL+GN+LA++ G+N VTLW+E + G+W V Sbjct: 209 LSKSYIATASQDRTVLIWTKDGKSNKWEKQPLTKEKFPDVCWRASWSLSGNVLAISGGDNKVTLWKENIQGKWESAGEV 287 The following BLAST results are available for this feature:
BLAST of DC887695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887695 ID=DC887695; Name=DC887695; organism=Citrus sinensis; type=EST; length=548bpback to top |