DC887689

Overview
NameDC887689
Unique NameDC887689
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length400
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DC887689 vs. ExPASy Swiss-Prot
Match: GLTR_ARATH (Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 3.095e-25
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = -3 
Query:  231 GYNPSISMDEINKAAVIHYNGNMKPWLDIAMNQYKSLWTKYVDNDMEFVQVCNFGL 398
            GYNP +SMDEI  A VIHYNGNMKPWLDIAMNQYKSLWTKYVDN+MEFVQ+CNFGL
Sbjct:  506 GYNPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCNFGL 561
[Close]
BLAST of DC887689 vs. ExPASy Swiss-Prot
Match: QUA1_ARATH (Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.428e-23
Identity = 45/56 (80.36%), Postives = 51/56 (91.07%), Query Frame = -3 
Query:  231 GYNPSISMDEINKAAVIHYNGNMKPWLDIAMNQYKSLWTKYVDNDMEFVQVCNFGL 398
            GYNPSISMDEI  AAV+H+NGNMKPWLDIAMNQ++ LWTK+VD D+EFVQ CNFGL
Sbjct:  504 GYNPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACNFGL 559
The following BLAST results are available for this feature:
BLAST of DC887689 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GLTR_ARATH3.095e-2587.50Uncharacterized glycosyltransferase At3g02350 OS=A... [more]
QUA1_ARATH8.428e-2380.36Glycosyltransferase QUASIMODO1 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionDC887689 EIC Citrus sinensis cDNA clone EIC0737 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887689 ID=DC887689; Name=DC887689; organism=Citrus sinensis; type=EST; length=400bp
TTGCGTTTTGATTGTTTACAATCTTAAGCTCAATGCTGTAAAAACTAATA
AGCATCTTAATCGAAGCATATTAACCGAGAAGAGACACACCATCACTAAG
CTTTGGAGAGGGTTACAACCAATTAGAGGAGACCAAAACTTGTATGAATA
TAAAGTAACCATCTATAAACCATCACTGAAAGTGTGTTTGTGTTACCTGA
AGAATAAGTGCTGTAACGCGACTTGAATTAGAGGCCAAAATTGCACACCT
GCACAAACTCCATATCATTATCCACATATTTAGTCCAGAGACTCTTGTAT
TGATTCATAGCAATGTCAAGCCAAGGTTTCATGTTTCCGTTGTAATGGAT
GACTGCAGCCTTATTGATTTCATCCATACTGATACTCGGATTGTACCCAA
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