DC887619
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.179e-71 Identity = 124/147 (84.35%), Postives = 137/147 (93.20%), Query Frame = -1 Query: 251 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 691 V+VT AWIKGEGVKIWFLAIIYFIAGVPGAY LWYRPLYRAFRT+SA+KFGWFF+FYLLHIGFCI A+VAPPI+FKGKSLTG+L A+DV+GD+ LVGIFYFIGFG FCLE+L+SIWVIQQVYM+FRG GK AEMKREAA GAM AAL Sbjct: 142 VSVTAAWIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFCILAAVAPPIVFKGKSLTGILSAIDVVGDYTLVGIFYFIGFGFFCLETLISIWVIQQVYMHFRGGGKTAEMKREAALGAMGAAL 288
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 261.151 bits (666), Expect = 3.886e-69 Identity = 119/147 (80.95%), Postives = 136/147 (92.52%), Query Frame = -1 Query: 251 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 691 +AVTTAWIKGEGV IW LA+IYFI+GVPG YVLWYRPLYRAFR++SA FGWFFLFY+LHI FC+FA+VAPPI+FKGKSL G+LPA+DV+ ALVGIFYFIGFGLFCLES+VSIWVIQQVYMYFRGSGKA +M+R+AARGAMRAA+ Sbjct: 145 IAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLFAAVAPPIVFKGKSLAGILPAIDVLSAQALVGIFYFIGFGLFCLESVVSIWVIQQVYMYFRGSGKADDMRRDAARGAMRAAI 291
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 8.657e-69 Identity = 122/147 (82.99%), Postives = 133/147 (90.48%), Query Frame = -1 Query: 251 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 691 VAVTTAWIKGEG IWFLAIIYFI+GVPGAYV+WYRPLYRA RT+SA+KFGWFF YL HI FC+FA+VAPPIIFKGKSLTG+LPA+DV+ + LVGIFYFIGFG FCLESLVSIWVIQQVYMYFRGSGKAAEMK+EA R AM AAL Sbjct: 136 VAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVFAAVAPPIIFKGKSLTGILPAIDVLSGNILVGIFYFIGFGFFCLESLVSIWVIQQVYMYFRGSGKAAEMKQEATRRAMMAAL 282
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.477e-68 Identity = 116/147 (78.91%), Postives = 134/147 (91.16%), Query Frame = -1 Query: 251 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 691 +AVTTAWIKGEGV IW LA+IYFIAGVPG YVLWYRPLYRAFRT+SA+ FGWFFLFY+LHI FC+FA+VAPP++FKGKSL G+LPA+DV+ A+VGIFYFIGF FCLES+VSIWVIQQVYMYFRGSGK +M+REAARGA+RAA+ Sbjct: 143 IAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVFAAVAPPVVFKGKSLAGILPAIDVLSGQAIVGIFYFIGFAFFCLESVVSIWVIQQVYMYFRGSGKQDQMRREAARGALRAAV 289
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.058e-66 Identity = 118/146 (80.82%), Postives = 134/146 (91.78%), Query Frame = -1 Query: 254 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 691 +A T AWIKG GV IW LAIIYFI+GVPGAYVLWYRPLY A RTESA+KFGWFFLFYL+HI FCI+++VAPP FKGKSL G+LPA+DV+G++A+VGIFYFIGFGLFCLESL+S+ VIQQVYMYFRGSGKAAEMKREAARGAMR+A Sbjct: 140 IATTAAWIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHILFCIWSAVAPPFPFKGKSLAGILPAIDVIGNNAIVGIFYFIGFGLFCLESLLSVVVIQQVYMYFRGSGKAAEMKREAARGAMRSA 285
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.805e-66 Identity = 114/146 (78.08%), Postives = 135/146 (92.47%), Query Frame = -1 Query: 254 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 691 +AVT+AW+KGEGVKIW LAIIYFI+GVPGAYVLWYRPLY A RT+SA+KFG FFL YL HI FC+F++VAPP++F+GKSL G+LPA+D++ +ALVGIFYF+GFGLFC+ESL+SIWVIQQVYMYFRGSGKAAEMKR+A RGAMRAA Sbjct: 160 IAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVFSAVAPPVVFEGKSLAGILPAIDLISKNALVGIFYFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAA 305
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSI (Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.805e-66 Identity = 114/146 (78.08%), Postives = 135/146 (92.47%), Query Frame = -1 Query: 254 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 691 +AVT+AW+KGEGVKIW LAIIYFI+GVPGAYVLWYRPLY A RT+SA+KFG FFL YL HI FC+F++VAPP++F+GKSL G+LPA+D++ +ALVGIFYF+GFGLFC+ESL+SIWVIQQVYMYFRGSGKAAEMKR+A RGAMRAA Sbjct: 160 IAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVFSAVAPPVVFEGKSLAGILPAIDLISKNALVGIFYFVGFGLFCVESLLSIWVIQQVYMYFRGSGKAAEMKRDATRGAMRAA 305
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.358e-66 Identity = 117/146 (80.14%), Postives = 133/146 (91.10%), Query Frame = -1 Query: 254 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 691 +A TTAW+KGEGV IW LAIIYFI+GVPGAYVLWYRPLY A RTESA+KFGWFFLFYL+HI FC++A+VAPP FKGKSL G+LPA+DV+G A+VGIFYF+GFGLFCLESL+SI VIQQVYMYFRGSGKAAEMKREAARGA+ +A Sbjct: 136 IATTTAWVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCVWAAVAPPFPFKGKSLAGILPAIDVIGRSAIVGIFYFVGFGLFCLESLLSIGVIQQVYMYFRGSGKAAEMKREAARGALSSA 281
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.697e-62 Identity = 105/146 (71.92%), Postives = 127/146 (86.99%), Query Frame = -1 Query: 254 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAA 691 + VT AWIKGEG KIWFLA+IYFI G PGAY LWYRPLYRA R ESA+KFGWFFLFYL+HI FC++A+V+P I+F GKSLTG+ PA+ ++G+ +VG+FYF+GF +FCLESL+S+WVIQ+VY+YFRGSGK AEMKREAAR A RAA Sbjct: 167 ICVTAAWIKGEGPKIWFLAVIYFILGCPGAYYLWYRPLYRAMRNESALKFGWFFLFYLVHIAFCVYAAVSPSILFVGKSLTGIFPAISLIGNTVIVGVFYFLGFAMFCLESLLSMWVIQRVYLYFRGSGKEAEMKREAARSAARAA 312
BLAST of DC887619 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.061e-58 Identity = 105/147 (71.43%), Postives = 124/147 (84.35%), Query Frame = -1 Query: 251 VAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFRTESAMKFGWFFLFYLLHIGFCIFASVAPPIIFKGKSLTGVLPAVDVMGDHALVGIFYFIGFGLFCLESLVSIWVIQQVYMYFRGSGKAAEMKREAARGAMRAAL 691 VAVT AWIKGEG IW L+IIYF+AGVPGAYVLWYRPLYRA RT+SA+KFG FF FY+ HI FC FA+VAPP+IF+GKSLTG LPA++++ +A VGI YFIG G FC+E+L++IWVIQQVY YFRGSGKAAEMKREA + + AL Sbjct: 137 VAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFCGFAAVAPPVIFQGKSLTGFLPAIELLTTNAAVGIMYFIGAGFFCIETLLNIWVIQQVYAYFRGSGKAAEMKREATKSTLMRAL 283 The following BLAST results are available for this feature:
BLAST of DC887619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887619 ID=DC887619; Name=DC887619; organism=Citrus sinensis; type=EST; length=691bpback to top |