DC887605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLM_ARATH (Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.771e-36 Identity = 73/162 (45.06%), Postives = 109/162 (67.28%), Query Frame = -1 Query: 170 LVSTAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKLKSK 655 LVST+ W+LL Y F +T+ SW+ +++VS FL GS++RLL K P+LSGLE+SE+ +E S R ++EE RWMF V E +WFVFA+ V G +LS + D T L+ G+VMG+TVP ++E+YGD+I++ + K KS+ Y EK++ ++K+K Sbjct: 33 LVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKVEPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNLLDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKIL-EMKNK 193
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.710e-18 Identity = 48/157 (30.57%), Postives = 88/157 (56.05%), Query Frame = -1 Query: 179 STAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKL 649 +TA WV+ E+ +++ LT+ + + +++ FL + + K PPK+ + I E+ L++A+ R + + ++ + F A+AGL VLS + + LTL Y +V+ TVP+ Y+KY DK+ GE A ++ ++ Y +DEKV+ K+ Sbjct: 108 ATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSKI 264
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17 Identity = 50/159 (31.45%), Postives = 85/159 (53.46%), Query Frame = -1 Query: 170 TAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKLKSK 646 TA WVL E+++++ L A+ ++ FL + + K P + + I E L++ + R + + +++ K F +AGL VLS + + + LTL YT V+ T+PV+YEKY DK+ GE A + ++ Y +DEKV++K+ SK Sbjct: 88 TASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISK 246
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17 Identity = 50/160 (31.25%), Postives = 85/160 (53.12%), Query Frame = -1 Query: 170 STAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKLKSK 649 +T W+L E+ ++N LT+ +++ ++ FL S + K P + + I E L++A+ R + + ++ + F +AGL VLS V + + LTL+Y V+ T+PV+YEKY DK+ GE A + ++ Y E D KV+ K+ SK Sbjct: 83 ATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSK 242
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17 Identity = 47/158 (29.75%), Postives = 87/158 (55.06%), Query Frame = -1 Query: 179 VSTAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKL 652 V+TAIWVL E+ +++FL++ + + ++ FL + + K PPK+ + I E+ L + ++ R + + + +++ + F V GL ++S V + + LTL+Y V+ TVP++YEK+ DK+ E + ++ Y DEKV+ KL Sbjct: 86 VATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKL 243
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 47/157 (29.94%), Postives = 82/157 (52.23%), Query Frame = -1 Query: 179 STAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKL 649 +T WVL E+ +++ LT+ + + ++ FL + + K PPK+ + I E+ L++A+ R + + ++ + F A+AGL VLS + LTL Y +V+ TVP+ Y+KY DK+ GE A + ++ Y +D KV K+ Sbjct: 104 ATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKI 260
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.659e-16 Identity = 47/158 (29.75%), Postives = 89/158 (56.33%), Query Frame = -1 Query: 179 VSTAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKL 652 V+TAIWVL E+ +++ L++ +++ + FL + L+ K P++ + + E++ L VA+S R + + + +++ + F V GL ++S V + + LTL+Y V+ TVP++YEK+ DK+ E A + ++ Y DEKV+ K+ Sbjct: 86 VATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKI 243
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLP_ARATH (Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 45/159 (28.30%), Postives = 81/159 (50.94%), Query Frame = -1 Query: 179 LVSTAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKL 655 ++ST W++ E FL+V+S + + ++ +F+ + ++ L L +SE+ A SFR + V+V + +F + V L +LS + ++ L TLLY G ++ +T+P +Y KY K+ +C T + Y+ VDE VI +L Sbjct: 58 IISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRL 216
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.751e-13 Identity = 40/154 (25.97%), Postives = 77/154 (50.00%), Query Frame = -1 Query: 179 IWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFYEEVDEKVIKKL 640 +W L+EV ++NF+T+ +M+ + F F+ + L E P + + + E S ++A SF + + V+ + +F L ++S + T+ + + LL+ G V T+PV+YE Y D + K ++ Y++VD V+ K+ Sbjct: 61 LWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKI 214
BLAST of DC887605 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11 Identity = 39/147 (26.53%), Postives = 71/147 (48.30%), Query Frame = -1 Query: 212 VSTAIWVLLEVYQFNFLTVASWLAMSIVSFTFLSGSIMRLLGKEPPKLSGLEISEKSALEVANSFRGVVEEFTRWMFHVSVEKQWFVFAQAVAGLLVLSYVATFSDLLTLLYTGIVMGMTVPVIYEKYGDKIKRCGETAKVKSRRFY 652 V+ A W++ E + + T+ S + + ++S FL +L + P L +ISE A E + R V + + +++ + ++ + L +LS + + D TL +T +++ MTVP YE+Y D I E K+R Y Sbjct: 42 VTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYIVGSIEFICNKTRELY 188 The following BLAST results are available for this feature:
BLAST of DC887605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887605 ID=DC887605; Name=DC887605; organism=Citrus sinensis; type=EST; length=655bpback to top |