DC887594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_VOLCA (Histone H3 OS=Volvox carteri GN=H3-I PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 60 LLIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_URECA (Histone H3 OS=Urechis caupo PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_TIGCA (Histone H3 OS=Tigriopus californicus PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_PLADU (Histone H3 OS=Platynereis dumerilii PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_MASBA (Histone H3 OS=Mastigamoeba balamuthi PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 60 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_DROME (Histone H3 OS=Drosophila melanogaster GN=His3 PE=1 SV=4) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_DROHY (Histone H3 OS=Drosophila hydei GN=His3 PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_CHITH (Histone H3 OS=Chironomus thummi thummi PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H3_ACRFO (Histone H3 OS=Acropora formosa PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVLALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of DC887594 vs. ExPASy Swiss-Prot
Match: H33_XENTR (Histone H3.3 OS=Xenopus tropicalis GN=TGas113e22.1 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 9.040e-25 Identity = 60/76 (78.95%), Postives = 60/76 (78.95%), Query Frame = -2 Query: 167 LLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 394 LLIRKLPFQRLVREIAQDFKTDLRF VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136 The following BLAST results are available for this feature:
BLAST of DC887594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887594 ID=DC887594; Name=DC887594; organism=Citrus sinensis; type=EST; length=395bpback to top |