DC887573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL183_ARATH (60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 3.952e-81 Identity = 147/170 (86.47%), Postives = 164/170 (96.47%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGIDLIAGGKSKK+KRTAPKS+D+YLKLLVKLYRFLVRR++SNF+ VILKRLFMSKVNK P+SLSRL +FM GK+DKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHS+TKPYVR KG Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAPLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKG 170
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL182_ARATH (60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=2 SV=2) HSP 1 Score: 300.442 bits (768), Expect = 3.952e-81 Identity = 147/170 (86.47%), Postives = 163/170 (95.88%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGIDLIAGGKSKK+KRTAPKS+D+YLKL VKLYRFLVRRT+S F+ VILKRLFMSKVNK P+SLSRL +FM GKEDKIAV+VGT+TDD+RV+E+PA+KVTALRFTE ARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR+KG Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAPLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKG 170
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_CICAR (60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 2.651e-77 Identity = 144/167 (86.23%), Postives = 157/167 (94.01%), Query Frame = -2 Query: 2 DLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 502 DL AGGK+KK+KRT+PKSNDIYLKLLVKLYRFLVRRTDSNF+ VILKRLFMSKVN+PP+SLSRL K+M+GKE KI VVVG VTDDIRVY+VP +KVTAL+FTETARARI+KAGGECLTFDQLALR PL +TVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG Sbjct: 1 DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 166
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL181_ARATH (Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3) HSP 1 Score: 270.396 bits (690), Expect = 4.379e-72 Identity = 135/171 (78.95%), Postives = 151/171 (88.30%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMKGKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPL-GQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGIDLIAGGKSKK+KRT PKS+D+YLKLLVK R+LVRRT+S F+ VILKRLFMSKVNK P+SLSRL ++M GK+ KIAV+VGTVTDD+R+ +VPAL VTALRFTE+ARARI KAGGECLTFDQLAL P +NTVLLRGPKN REAVKHFGPAPGVPHSHTKPYVR G Sbjct: 1 MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_IXOSC (60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 7.252e-59 Identity = 113/172 (65.70%), Postives = 144/172 (83.72%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K R PKS ++YL LLVK+YRFL RR+ + F++++LKRLFMS++NKP +SL+R+T+FMK G+E+ IAVVVGTVTDD+R+Y+VP L++ ALR TE ARARI KAGGE LTFDQLA++AP G+ TVL++GP+N+REA +HFGPAPGVPHSHTKPYVRSKG Sbjct: 1 MGID-INHKYDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKPVISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGEILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_TIMBA (60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.237e-58 Identity = 114/172 (66.28%), Postives = 139/172 (80.81%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MGID I +K +RT PKS D+YL+LLVKLYR+L RRT + F+K+ILKRLFMSK+ +PP+SLS++ +FMK G+E AV+VGTVTDD R++E+P L + ALR T+TARA I KAGGE +TFDQLALR+P G TVLL+G +NAREAVKHFGPAPGVPHSH KP VRSKG Sbjct: 1 MGID-INHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRPPISLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSICALRVTQTARAGILKAGGEVITFDQLALRSPTGSKTVLLQGKRNAREAVKHFGPAPGVPHSHAKPLVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_ICTPU (60S ribosomal protein L18 OS=Ictalurus punctatus GN=rpl18 PE=2 SV=3) HSP 1 Score: 225.713 bits (574), Expect = 1.237e-58 Identity = 113/172 (65.70%), Postives = 136/172 (79.07%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I K +K RT PKS DIYL+LLVKLYRFL RR+D+ F+KV+LKRLFMSK N+PP++LSRL + MK G+E+KIAVVVGT+TDD+R+ +P LKV ALR T AR RI KAGG+ +TFDQLA+ P GQ TVLL GP+ ARE +HFG APG PHSHTKPY+RSKG Sbjct: 1 MGVD-IRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRPPLALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQVMTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYIRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_MOUSE (60S ribosomal protein L18 OS=Mus musculus GN=Rpl18 PE=2 SV=3) HSP 1 Score: 224.172 bits (570), Expect = 3.599e-58 Identity = 113/172 (65.70%), Postives = 137/172 (79.65%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+PP+SLSR+ + MK G+E+K AVVVGTVTDD+R+ EVP LKV ALR + AR+RI KAGG+ LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSHTKPYVRSKG Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_RAT (60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=2 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 4.701e-58 Identity = 112/172 (65.12%), Postives = 137/172 (79.65%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+PP+SLSR+ + MK G+E+K AVVVGT+TDD+R+ EVP LKV ALR + AR+RI KAGG+ LTFDQLAL +P G+ TVLL GP+ RE +HFG APG PHSHTKPYVRSKG Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKG 171
BLAST of DC887573 vs. ExPASy Swiss-Prot
Match: RL18_MACFA (60S ribosomal protein L18 OS=Macaca fascicularis GN=RPL18 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 1.368e-57 Identity = 113/172 (65.70%), Postives = 136/172 (79.07%), Query Frame = -2 Query: 2 MGIDLIAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTDSNFDKVILKRLFMSKVNKPPMSLSRLTKFMK--GKEDKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKG 511 MG+D I K +K +R PKS DIYL+LLVKLYRFL RRT+S F++V+LKRLFMS+ N+PP+SLSR+ + MK G+E+K AVVVGT+TDD+RV EVP LKV ALR T AR+RI +AGG+ LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKG Sbjct: 1 MGVD-IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKG 171 The following BLAST results are available for this feature:
BLAST of DC887573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887573 ID=DC887573; Name=DC887573; organism=Citrus sinensis; type=EST; length=569bpback to top |