DC887520

Overview
NameDC887520
Unique NameDC887520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length233
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DC887520 vs. ExPASy Swiss-Prot
Match: PHO1_ARATH (Putative phosphate transporter 1 OS=Arabidopsis thaliana GN=PHO1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 5.232e-12
Identity = 32/75 (42.67%), Postives = 50/75 (66.67%), Query Frame = -1 
Query:    3 EELRKVEGQLRVVFIEFYQKLRLLKNYSFMNLAAFSKIMKKYDKITSTRASRSYMKIVDNSYLGSSDDVTSLLEK 227
            + ++  E ++R  F+E Y+ L LLK YS +N+ AF+KIMKK+DK+    AS +Y+K+V  S   SSD V  L+++
Sbjct:  279 KNIQSAEKKIRSAFVELYRGLGLLKTYSSLNMIAFTKIMKKFDKVAGQNASSTYLKVVKRSQFISSDKVVRLMDE 353
The following BLAST results are available for this feature:
BLAST of DC887520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PHO1_ARATH5.232e-1242.67Putative phosphate transporter 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionDC887520 EIC Citrus sinensis cDNA clone EIC0494 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887520 ID=DC887520; Name=DC887520; organism=Citrus sinensis; type=EST; length=233bp
ACTTTTTCNAGCAAACTGGTAACATCATCAGAGCTGCCGAGGTAAGAGTT
GTCCACAATTTTCATATATGATCTGGATGCTCTCGTCGATGTGATCTTAT
CATACTTCTTCATGATCTTGGAAAATGCTGCAAGATTCATGAAACTGTAG
TTCTTTAGAAGGCGTAGCTTCTGATAGAATTCAATAAACACTACTCTCAA
TTGTCCTTCAACTTTCCTCAACTCCTCTTTTCT
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