DC887517
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.569e-25 Identity = 51/74 (68.92%), Postives = 66/74 (89.19%), Query Frame = -2 Query: 256 QVTKRVET-DESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAGVFGGPRDDE 474 +VTKRV++ D+ EW+ WNWRTEGD+M NGAFFV SG G+S+ Y+KASSV+PK+A+L+D+LT NAGVFGGPRDD+ Sbjct: 346 EVTKRVDSKDDGEWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAGVFGGPRDDQ 419
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.195e-19 Identity = 41/67 (61.19%), Postives = 53/67 (79.10%), Query Frame = -2 Query: 274 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAGVFG 474 +VTKRVET + +W GWNWR+EGD++VNGAFFV SG G +Y KA SVEPKSA+ I ++T ++GV G Sbjct: 349 EVTKRVETPDGDWKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVLG 415
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.060e-18 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -2 Query: 274 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAGVFG 474 +VTKRVETD SEW WNWR+EGD+++NGAFF PSG G S Y +ASS+ K ++++D +T AG G Sbjct: 397 EVTKRVETDASEWKKWNWRSEGDLLLNGAFFRPSGAGASASYGRASSLAAKPSSMVDTITSTAGALG 463
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 5.594e-15 Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTKRV+T S W GWNWR+EGD++ NGA+F SG S YA+ASS+ KS++L+ +T +AG Sbjct: 356 EVTKRVDTPASHWKGWNWRSEGDLLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAG 419
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.126e-14 Identity = 33/64 (51.56%), Postives = 47/64 (73.44%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTKRV + EW WNWR++GD+M+NGA+F SG G S YA+ASS+ KS++L+ LT ++G Sbjct: 345 EVTKRVGAGKGEWNNWNWRSQGDLMLNGAYFTSSGAGASANYARASSLAAKSSSLVGMLTSSSG 408
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.185e-14 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTK + S+W WNWR+EGD+ +NGAFF PSG G S+ YAKASS+ + ++L+ +T NAG Sbjct: 335 EVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAG 398
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.055e-13 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTKR T ES+W WNWR+EGD+ +NGAFF SG G YA+ASS+ KS++L+ +T +G Sbjct: 343 EVTKREYTGESKWKHWNWRSEGDLFLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSG 406
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.378e-13 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAG 474 +VTK + ESEW WNWR+ GD+++NGAFF PSG S+ YAKASS+ K ++L+ LT +G Sbjct: 335 EVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSG 398
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.350e-13 Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = -2 Query: 265 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQYAKASSVEPKSAALIDRLTMNAGVF---GGPR 474 +VTKR + +W WNWR+EGD+ +NGAFF SG GL YA+ASS+ KS++L+ +T NAG GG R Sbjct: 344 EVTKRDYAGQWQWRHWNWRSEGDLFLNGAFFTRSGSGLGASYARASSLAAKSSSLVGVITYNAGALNCRGGRR 416
BLAST of DC887517 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.989e-12 Identity = 31/66 (46.97%), Postives = 47/66 (71.21%), Query Frame = -2 Query: 283 QVTKRVETDESEWAGWNWRTEGDVMVNGAFFVPSGVGLSTQ--YAKASSVEPKSAALIDRLTMNAG 474 +VTK + ES+W WNWR+EGD+M+NGA+F +G G S+ YA+ASS+ + ++L+ +T NAG Sbjct: 329 EVTKHEDAPESQWRSWNWRSEGDLMLNGAYFRQTGAGASSSSTYARASSLSARPSSLVGSITTNAG 394 The following BLAST results are available for this feature:
BLAST of DC887517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887517 ID=DC887517; Name=DC887517; organism=Citrus sinensis; type=EST; length=478bpback to top |