DC887515

Overview
NameDC887515
Unique NameDC887515
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:121..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 6.227e-84
Identity = 155/188 (82.45%), Postives = 164/188 (87.23%), Query Frame = -1
Query:  174 LLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 737
            LL T S+IQAKKS +NLKEIT+KVYFDVEI GK AGRIVMGLFGK VPKT ENFRALCTGEKGIGK+GK LHYKGS+FHRIIPSFMLQ           GESIYGEKF DENFKLKHTGPG LSMANAG DTNGSQFFITTVTTSWLDGRHVVFGKV++GMDVVYKVEAEG Q+GTPKSKVV+ DSGE
Sbjct:   14 LLGTLSAIQAKKSKENLKEITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGE 201          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 299.286 bits (765), Expect = 1.436e-80
Identity = 147/188 (78.19%), Postives = 164/188 (87.23%), Query Frame = -1
Query:  174 LLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 737
            L    +SIQAK   ++LKE+T+KVYFDVEI GK AGR+V+GLFGKAVPKTAENFRALCTGEKG+GKSGKPLHYKGS FHRIIPSFM+Q           GESIYG+KF DENFKLKHTGPG+LSMAN+G DTNGSQFFITTVTTSWLDGRHVVFGKV+ GMDVVYK+EAEG+Q+GTPKSKVV+ADSGE
Sbjct:   14 LFGAIASIQAK---EDLKEVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGE 198          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.456e-65
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = -1
Query:  174 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 671
            +V+FD+ IAGKP GRIVM L+   VPKTAENFRALCTGEKG+GKSGKPLH+KGS FHRIIP FM+Q           GESIYGEKFPDENFK KHTGPG+LSMANAGP+TNGSQFF+ TV T+WLDG+HVVFG+V+ G+D+V KVE  G  +GTPKS+ ++AD G+
Sbjct:    5 RVFFDITIAGKPTGRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSGTPKSECLIADCGQ 170          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.213e-64
Identity = 117/170 (68.82%), Postives = 137/170 (80.59%), Query Frame = -1
Query:  174 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 683
            +ITNKV+FD+EI  KPAGRIV GL+GK VPKT ENFRALCTGEKG+G SGKPLHYK S FHRIIP+FM+Q           GESIYG+KF DENFK+KH+ PGLLSMANAGP+TNGSQFFITTV TSWLDGRH VFG+V+ GMD+V  +E+ G Q+GTP     +++SGE
Sbjct:   27 KITNKVFFDIEIDNKPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLESIGSQSGTPSKIAKISNSGE 196          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CYP3_CAEEL (Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhabditis elegans GN=cyn-3 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.264e-60
Identity = 111/167 (66.47%), Postives = 131/167 (78.44%), Query Frame = -1
Query:  174 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 674
            +KV+FD+ I GK +GRIVM L+   VPKTA NFRALCTGE GIGKSGKPLH+KGS FHRIIP+FM+Q           GESIYGEKFPDENFK KHTGPG+LSMANAGP+TNGSQFF+ TV T WLDG+HVVFG+V+ G+DVV  VE+ G Q+G P    ++AD G+
Sbjct:    4 SKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQ 170          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 9.055e-59
Identity = 109/166 (65.66%), Postives = 128/166 (77.11%), Query Frame = -1
Query:  174 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 671
            KV+FD+ I GK  GRIVM L+   VPKTAENFRALCTGEKG GKSGK LH+KGS FHRIIP FM+Q           GESI+GEKF DENFK KHTGPG+LSMAN G +TNGSQFF+ TV T+WLDG+HVVFGKV+ GMDVV  +E++G ++G P +  V+AD GE
Sbjct:    5 KVFFDITIGGKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDGAPSAPCVIADCGE 170          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.545e-58
Identity = 109/166 (65.66%), Postives = 123/166 (74.10%), Query Frame = -1
Query:  174 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 671
            KV+FD+ I G PAGR+VM LF    PKTAENFRALCTGEKG+GK GKPLHYKGSTFHR+IP FM Q           GESIYG KF DENF  KHTGPG+LSMANAGP TNGSQFFI T  T WL+G+HVVFG+V+ GMDV+ K EA G  +G     VV+AD G+
Sbjct:    5 KVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQ 170          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.017e-58
Identity = 109/166 (65.66%), Postives = 125/166 (75.30%), Query Frame = -1
Query:  174 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 671
            +V+FD+ + G PAGRIVM L+   VPKTAENFRALCTGEKG+GKSGKPLHYKGSTFHR+IP FM Q           GESIYGEKFPDE F  K   PG+LSMANAGP+TNGSQFFI TV T WLDG+HVVFG+V+ GMDVV  +E  G +NG+    V VAD G+
Sbjct:    5 RVFFDMTVGGAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQ 170          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.869e-58
Identity = 107/166 (64.46%), Postives = 127/166 (76.51%), Query Frame = -1
Query:  174 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 671
            KV+FD+ I G PAG+IVM L+    PKTAENFRALCTGEKG+G+SGKPLH+KGS+FHR+IP+FM Q           GESIYG KF DENF+ KHTGPG+LSMANAG +TNGSQFFI TV T WLDG+HVVFG+V+ G+DVV  +E  G  +G P   VV+AD GE
Sbjct:    6 KVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGE 171          
BLAST of DC887515 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.230e-57
Identity = 107/166 (64.46%), Postives = 126/166 (75.90%), Query Frame = -1
Query:  174 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 671
            KVYFD+ I G+PAGRIVM L+    P+TAENFRALCTGEKG+G +GKPLH+KGS FHR+IP+FM Q           GESIYG KF DENF+ KHTGPG+LSMANAG +TNGSQFFI TV T WLDG+HVVFG+V+ G+DVV  +E  G  +G P   VVVAD G+
Sbjct:    5 KVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQ 170          
The following BLAST results are available for this feature:
BLAST of DC887515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CP20A_ARATH6.227e-8482.45Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]
CP19D_ARATH1.436e-8078.19Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]
CYP7_CAEEL8.456e-6569.28Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
PPIB_DICDI3.213e-6468.82Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
CYP3_CAEEL1.264e-6066.47Peptidyl-prolyl cis-trans isomerase 3 OS=Caenorhab... [more]
CYP2_CAEEL9.055e-5965.66Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CYPH_SOLLC1.545e-5865.66Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_MAIZE2.017e-5865.66Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
CP19B_ARATH5.869e-5864.46Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CP18C_ARATH2.230e-5764.46Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionDC887515 EIC Citrus sinensis cDNA clone EIC0484 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887515 ID=DC887515; Name=DC887515; organism=Citrus sinensis; type=EST; length=737bp
AGNAGGTCCCCTTAAATGAAGCACCAACTTGGCAAACAACCTAGGACATT
TTAAAATGTCTATTACATGATAAATAGGCAAATTAAGAGTATCTTCATGA
AGGTTGAAAAGACGAGAGGATTAAAAAGGTGTATAGCGTAATTATATAAT
TATGGGGGAAATCACAGAGGAAGTTCACCGCTGTCTGCAACGACGACTTT
GCTCTTCGGAGTGCCATTCTGCCTCCCTTCAGCTTCAACCTTGTAAACTA
CATCCATCCCCGATAGCACCTTTCCAAATACAACATGCCTGCCATCCAAC
CAGCTAGTTGTCACAGTTGTAATGAAGAATTGTGAACCATTGGTGTCTGG
ACCAGCATTTGCCATTGACAAAAGCCCTGGGCCAGTGTGCTTCAGTTTGA
AATTTTCGTCAGGGAACTTCTCTCCATAAATTGACTCTCCACCTCTTCCA
TCACCAAGAGTGAAATCACCTCCTTGAAGCATAAAGCTGGGAATAATCCT
ATGGAACGTACTTCCCTTGTAGTGGAGTGGCTTCCCGCTCTTGCCAATCC
CTTTCTCCCCTGTGCACAAAGCTCGGAAATTTTCTGCAGTTTTAGGGACT
GCCTTTCCAAAGAGACCCATTACAATACGTCCGGCAGGTTTTCCAGCAAT
CTCAACGTCAAAGTAAACTTTGTTTGTGATTTCTTTCAAATTCTGATCCG
ATTTCTTCGCCTGAATTGAAGAGAAAGTGGCCAACAG
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