DC887497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887497 vs. ExPASy Swiss-Prot
Match: KEULE_ARATH (SNARE-interacting protein KEULE OS=Arabidopsis thaliana GN=KEU PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.313e-37 Identity = 74/85 (87.06%), Postives = 81/85 (95.29%), Query Frame = -2 Query: 419 AAHSMRSRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFIT 673 AA SMRSRRTPTWA+PR SDDGYSSDSVL+HASSDF+KMGQRIFVFIVGGATRSEL+VCHKL+ KL REV+LGS+SLDDPPQFIT Sbjct: 564 AAQSMRSRRTPTWAKPRGSDDGYSSDSVLRHASSDFRKMGQRIFVFIVGGATRSELKVCHKLSTKLKREVILGSTSLDDPPQFIT 648
BLAST of DC887497 vs. ExPASy Swiss-Prot
Match: SEC1A_ARATH (Protein transport Sec1a OS=Arabidopsis thaliana GN=SEC1A PE=2 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 6.101e-35 Identity = 70/83 (84.34%), Postives = 77/83 (92.77%), Query Frame = -2 Query: 419 HSMRSRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFIT 667 HSMRSRRT TWARP SSDDGYSSDSVLK AS++FKK+GQRIFVFI+GGATRSELRVCHKLT+ L REVVLGS+S DDPPQ+IT Sbjct: 568 HSMRSRRTATWARPHSSDDGYSSDSVLKSASTEFKKLGQRIFVFIIGGATRSELRVCHKLTSSLRREVVLGSTSFDDPPQYIT 650
BLAST of DC887497 vs. ExPASy Swiss-Prot
Match: SEC1A_ORYSJ (Probable protein transport Sec1a OS=Oryza sativa subsp. japonica GN=Os04g0252400 PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 5.122e-33 Identity = 66/90 (73.33%), Postives = 77/90 (85.56%), Query Frame = -2 Query: 404 AHSMRSRRTP-TWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFITVFRDL 670 A SMRSRRT TWARPR SDDGYSSDSVLKH SS+ +K+GQR+FVF++GGATRSEL HKL++KL RE++LGSSSLDDPPQFIT + L Sbjct: 564 AQSMRSRRTGGTWARPRDSDDGYSSDSVLKHTSSNSRKLGQRLFVFVIGGATRSELCAAHKLSSKLKREIILGSSSLDDPPQFITKLKML 653 HSP 2 Score: 26.9498 bits (58), Expect = 5.122e-33 Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = -3 Query: 289 LQKLKMLTAHELSLDDIQI 345 + KLKML+ +L+LDD+QI Sbjct: 647 ITKLKMLSTDDLTLDDLQI 665
BLAST of DC887497 vs. ExPASy Swiss-Prot
Match: SEC1B_ORYSJ (Probable protein transport Sec1b OS=Oryza sativa subsp. japonica GN=Os06g0135900 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.533e-29 Identity = 62/88 (70.45%), Postives = 74/88 (84.09%), Query Frame = -2 Query: 404 SMRSRRTPTWARPRSSDDGYSSDS-VLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFITVFRDL 664 S RSRRTPTWA+ R+SDD SSDS VL+H S+DFK++G RIFVF++GGATRSELR HKLT KL RE+VLGSSS+DDPPQFI+ + L Sbjct: 564 SRRSRRTPTWAKSRNSDDSQSSDSSVLRHGSNDFKRLGNRIFVFMIGGATRSELRTVHKLTMKLKREIVLGSSSIDDPPQFISKLKML 651
BLAST of DC887497 vs. ExPASy Swiss-Prot
Match: SEC1B_ARATH (Protein transport Sec1b OS=Arabidopsis thaliana GN=SEC1B PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.224e-28 Identity = 63/84 (75.00%), Postives = 68/84 (80.95%), Query Frame = -2 Query: 404 SRRTPTWARPRSSDDGYSSDSVLKHASSDFKKMGQRIFVFIVGGATRSELRVCHKLTAKLNREVVLGSSSLDDPPQFITVFRDL 655 SRRTPTWAR SDDGY SDSVL ASS FK+ GQRIFVFIVGGATRSELRVCHKLT KL+REV+LGSSS DP F+T + L Sbjct: 566 SRRTPTWARRHLSDDGYFSDSVLGRASSGFKRKGQRIFVFIVGGATRSELRVCHKLTEKLDREVILGSSSFLDPLTFLTKMKQL 649 The following BLAST results are available for this feature:
BLAST of DC887497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887497 ID=DC887497; Name=DC887497; organism=Citrus sinensis; type=EST; length=683bpback to top |