DC887485

Overview
NameDC887485
Unique NameDC887485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1574 contig Csv1_Contig1574:1348..1860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.115e-54
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = -1
Query:  208 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 513
            VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR+
Sbjct:  433 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRL 534          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 5.535e-54
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = -1
Query:  208 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 513
            VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERLRKRR+
Sbjct:  432 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRL 533          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 5.535e-54
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = -1
Query:  208 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 513
            VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERLRKRR+
Sbjct:  432 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRL 533          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 5.181e-52
Identity = 94/102 (92.16%), Postives = 100/102 (98.04%), Query Frame = -1
Query:  208 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 513
            ++DPMHGNTIKAPCGLKTRPFDSI AEVRAFFDVH+QEGSHPGG+HLEMTGQNVTECIGGSRTVTFDDLS RYHTHCDPRLNASQSLELAFIIAERLR+RR+
Sbjct:  423 ITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHDQEGSHPGGIHLEMTGQNVTECIGGSRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAERLRRRRM 524          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.667e-50
Identity = 92/102 (90.20%), Postives = 98/102 (96.08%), Query Frame = -1
Query:  208 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 513
            V DPMHGNTIKAPCGLKTR FDSI AEVRAFFDVHEQEGSHPGG+HLEMTGQNVTECIGGSRTVT+DDL SRYHTHCDPRLNASQSLEL+FI+AERLR+RR+
Sbjct:  405 VCDPMHGNTIKAPCGLKTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRM 506          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 3.713e-50
Identity = 93/102 (91.18%), Postives = 99/102 (97.06%), Query Frame = -1
Query:  208 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 513
            ++DPMHGNTIKAPCGLKTRPFDSI AEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDL  RYHTHCDPRLNASQSLEL+FIIAERLR++RI
Sbjct:  438 ITDPMHGNTIKAPCGLKTRPFDSI-AEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELSFIIAERLRRKRI 538          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 6.333e-50
Identity = 93/101 (92.08%), Postives = 96/101 (95.05%), Query Frame = -1
Query:  211 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR 513
            V DPMHGNTIKAPCGLKTR FDSI AEVRAF DVHEQEGSH GG+HLEMTGQNVTECIGGSRTVT+DDLSSRYHTHCDPRLNASQSLELAFI+AERLRKRR
Sbjct:  418 VCDPMHGNTIKAPCGLKTRAFDSILAEVRAFLDVHEQEGSHAGGIHLEMTGQNVTECIGGSRTVTYDDLSSRYHTHCDPRLNASQSLELAFIVAERLRKRR 518          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 7.002e-49
Identity = 90/102 (88.24%), Postives = 97/102 (95.10%), Query Frame = -1
Query:  208 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 513
            V DPMHGNTIKAPCGLKTR FDSI+AEVRAFFDVHEQEGSHP  +HLEMTGQNVTECIGGSRTVT+DDL SRYHTHCDPRLNASQSLEL+FI+AERLR+RR+
Sbjct:  405 VCDPMHGNTIKAPCGLKTRAFDSIQAEVRAFFDVHEQEGSHPWCIHLEMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRM 506          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 191.43 bits (485), Expect = 2.037e-48
Identity = 90/102 (88.24%), Postives = 98/102 (96.08%), Query Frame = -1
Query:  208 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRI 513
            VSDPMHGNTI AP GLKTR FD+IRAE+RAFFDVH+QEGS PGGVHLEMTGQNVTEC+GGSRT+T++DLSSRYHTHCDPRLNASQSLELAFIIAERLRKRR+
Sbjct:  395 VSDPMHGNTIMAPGGLKTRSFDAIRAELRAFFDVHDQEGSFPGGVHLEMTGQNVTECVGGSRTITYNDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRL 496          
BLAST of DC887485 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 2.760e-37
Identity = 75/99 (75.76%), Postives = 82/99 (82.83%), Query Frame = -1
Query:  217 VSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRK 513
            V DPMHGNTIKAPCGLKTR FD+I AEVRAF+DVHEQEG+ PG           TEC+GGSRT+T+DD  +RYHTHCDPRLNASQSLELAFIIAERLRK
Sbjct:  396 VCDPMHGNTIKAPCGLKTRAFDAILAEVRAFYDVHEQEGTLPG-----------TECVGGSRTITYDDRQTRYHTHCDPRLNASQSLELAFIIAERLRK 483          
The following BLAST results are available for this feature:
BLAST of DC887485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AROF_TOBAC1.115e-5499.02Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC5.535e-5497.06Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLTU5.535e-5497.06Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ORYSJ5.181e-5292.16Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_SOLTU1.667e-5090.20Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ3.713e-5091.18Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ARATH6.333e-5092.08Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLLC7.002e-4988.24Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH2.037e-4888.24Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_CATRO2.760e-3775.76Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]

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Properties
Property NameValue
Genbank descriptionDC887485 EIC Citrus sinensis cDNA clone EIC0438 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887485 ID=DC887485; Name=DC887485; organism=Citrus sinensis; type=EST; length=513bp
CATATTTTTTTATTCCTTCGTTCCTTAAGTCTCAAGCCATCATGTCCTTT
TAATATACACATTCAGTACATGACATAAATTAAATCAAAAAACCAAAATT
AAAAATACTAGCACAGCTGCTAAACTTGAAGAAAAATAATAATATATGCC
AGCAGTACTCGGGCCATTCTACAGGAGAGAAGAAGAGGCAAGAGGTTGCT
GTGAGCTAATCCTCCTCTTTCTGAGGCGCTCGGCAATGATGAAGGCAAGC
TCAAGTGACTGTGAAGCATTGAGCCTAGGGTCACAGTGGGTGTGGTAGCG
TGAACTCAAGTCGTCGAATGTCACTGTTCTTGACCCACCGATGCACTCTG
TCACATTCTGGCCTGTCATCTCCAAATGTACTCCTCCCGGGTGACTTCCT
TCTTGCTCATGCACATCAAAGAATGCTCTCACTTCAGCCCTGATAGAATC
GAANGGACGAGTTTTCAGGCCGCAGGGAGCCTTGATGGTGTTACCATGCA
TAGGGTCACTGAC
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