DC887450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887450 vs. ExPASy Swiss-Prot
Match: T112A_ARATH (TRM112-like protein At1g22270 OS=Arabidopsis thaliana GN=At1g22270 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.543e-27 Identity = 63/111 (56.76%), Postives = 73/111 (65.77%), Query Frame = -2 Query: 287 KGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYA-XXXXXXXXXXXXXXXDFLRKFXXXXXXXXXXXXXLVCPETGRKFPVNKGIPNMLLHEDEV 616 KGV +GFPL IE VIEK+VDFNPDF++++F KIEW+ALV+ +RSMGYA FL+K LVCPETGRKFPVNKGIPNMLLHEDEV Sbjct: 14 KGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSMGYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLHEDEV 124
BLAST of DC887450 vs. ExPASy Swiss-Prot
Match: T112B_ARATH (TRM112-like protein At1g78190 OS=Arabidopsis thaliana GN=At1g78190 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.184e-24 Identity = 61/111 (54.95%), Postives = 68/111 (61.26%), Query Frame = -2 Query: 287 KGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYA-XXXXXXXXXXXXXXXDFLRKFXXXXXXXXXXXXXLVCPETGRKFPVNKGIPNMLLHEDEV 616 KGV N FPL IE EKV K+VDFNPDFL+ +F KI+W+ALV +RSM Y FLRKF LVCPETGRKF V+KGIPNMLLHEDEV Sbjct: 14 KGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSMEYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLHEDEV 124
BLAST of DC887450 vs. ExPASy Swiss-Prot
Match: TR112_MOUSE (tRNA methyltransferase 112 homolog OS=Mus musculus GN=Trmt112 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = -2 Query: 290 GFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXDFLRKFXXXXXXXXXXXXXLVCPETGRKFPVNKGIPNMLLHEDE 601 GFPL ++ +V V+FNP+F+ + PK+EW ALVQA+ ++ A FLRK L CPE+GR FP+++GIPNMLL+++E Sbjct: 20 GFPLRLQATEVRINPVEFNPEFVARMIPKVEWAALVQAADTLNLA-EVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNMLLNDEE 122
BLAST of DC887450 vs. ExPASy Swiss-Prot
Match: TR112_DROME (TRM112-like protein OS=Drosophila melanogaster GN=CG12975 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 9.172e-13 Identity = 40/110 (36.36%), Postives = 55/110 (50.00%), Query Frame = -2 Query: 287 KGVANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXDFLRKFXXXXXXXXXXXXXLVCPETGRKFPVNKGIPNMLLHEDEV 616 KGV GFPL + + K + +FNP F++ I PK++W A+ A++ L+K L CPETGR FP++ GIPNMLL+EDEV Sbjct: 15 KGVKVGFPLKLTINKKEVVESEFNPTFVERILPKLDWSAVYGAAQVAELTEDIPAVQPENIVENELLLQKLHHLLFEIDVLEGQLECPETGRVFPISDGIPNMLLNEDEV 124
BLAST of DC887450 vs. ExPASy Swiss-Prot
Match: TR112_BOVIN (tRNA methyltransferase 112 homolog OS=Bos taurus GN=TRMT112 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.043e-12 Identity = 38/104 (36.54%), Postives = 57/104 (54.81%), Query Frame = -2 Query: 290 GFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXDFLRKFXXXXXXXXXXXXXLVCPETGRKFPVNKGIPNMLLHEDE 601 GFPL ++ +V V+FNPDF+ + PK+EW AL++A+ + + +FLRK L CPE+GR FP+++GIPNMLL ++E Sbjct: 20 GFPLRLQATEVRINPVEFNPDFIVRMIPKVEWAALLEAADHL-HLIQVPKEPIQGYEHNEEFLRKMHHVLLEVEVLEGTLQCPESGRVFPISRGIPNMLLSDEE 122
BLAST of DC887450 vs. ExPASy Swiss-Prot
Match: TR112_HUMAN (tRNA methyltransferase 112 homolog OS=Homo sapiens GN=TRMT112 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.585e-11 Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = -2 Query: 290 ANGFPLLIEVEKVIEKQVDFNPDFLKNIFPKIEWQALVQASRSMGYAXXXXXXXXXXXXXXXDFLRKFXXXXXXXXXXXXXLVCPETGRKFPVNKGIPNMLLHEDE 607 + GFPL ++ +V V+FNP+F+ + PK+EW A ++A+ ++ FLR L CPE+GR FP+++GIPNMLL E+E Sbjct: 18 SRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADNLRLIQVPKGPVEGYEENEE-FLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSEEE 122 The following BLAST results are available for this feature:
BLAST of DC887450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887450 ID=DC887450; Name=DC887450; organism=Citrus sinensis; type=EST; length=617bpback to top |