DC887408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL35_EUPES (60S ribosomal protein L35 OS=Euphorbia esula GN=RPL35 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.307e-43 Identity = 93/113 (82.30%), Postives = 96/113 (84.96%), Query Frame = -3 Query: 236 QKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 574 QK+K + LRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQ SLKTEREKK+EMYFPMRKYAIKV Sbjct: 11 QKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKLALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQQSLKTEREKKKEMYFPMRKYAIKV 123
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL352_ARATH (60S ribosomal protein L35-2 OS=Arabidopsis thaliana GN=RPL35B PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.637e-42 Identity = 92/113 (81.42%), Postives = 96/113 (84.96%), Query Frame = -3 Query: 236 QKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 574 +KSK D LRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK+EMYFP+RKYAIKV Sbjct: 11 EKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAIKV 123
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL354_ARATH (60S ribosomal protein L35-4 OS=Arabidopsis thaliana GN=RPL35D PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.792e-42 Identity = 92/112 (82.14%), Postives = 95/112 (84.82%), Query Frame = -3 Query: 236 KSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 571 KSK D LRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK+EMYFP+RKYAIKV Sbjct: 12 KSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYAIKV 123
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL351_ARATH (60S ribosomal protein L35-1 OS=Arabidopsis thaliana GN=RPL35A PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.386e-41 Identity = 91/113 (80.53%), Postives = 95/113 (84.07%), Query Frame = -3 Query: 236 QKSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 574 +KSK D LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK+EMYFP+RKYAIKV Sbjct: 11 EKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYAIKV 123
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL353_ARATH (60S ribosomal protein L35-3 OS=Arabidopsis thaliana GN=RPL35C PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 5.265e-41 Identity = 90/112 (80.36%), Postives = 94/112 (83.93%), Query Frame = -3 Query: 236 KSKVDXXXXXXXXXXXXXXLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIKV 571 KSK D LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYKNKK LPLDLRPKKTRAIRRRLTKHQASLKTEREKK++MYFP+RKYAIKV Sbjct: 12 KSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYAIKV 123
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL35_RAT (60S ribosomal protein L35 OS=Rattus norvegicus GN=Rpl35 PE=1 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 4.623e-29 Identity = 62/91 (68.13%), Postives = 79/91 (86.81%), Query Frame = -3 Query: 239 RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 511 RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+ LKT++++++E +P+RKYA+K Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYAVK 122
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL35_MOUSE (60S ribosomal protein L35 OS=Mus musculus GN=Rpl35 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.623e-29 Identity = 62/91 (68.13%), Postives = 79/91 (86.81%), Query Frame = -3 Query: 239 RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 511 RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRLTKH+ LKT++++++E +P+RKYA+K Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLTKHEEKLKTKKQQRKERLYPLRKYAVK 122
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL35_HUMAN (60S ribosomal protein L35 OS=Homo sapiens GN=RPL35 PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.345e-28 Identity = 61/91 (67.03%), Postives = 79/91 (86.81%), Query Frame = -3 Query: 239 RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 511 RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA+K Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVK 122
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL35_CHICK (60S ribosomal protein L35 OS=Gallus gallus GN=RPL35 PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.345e-28 Identity = 62/91 (68.13%), Postives = 79/91 (86.81%), Query Frame = -3 Query: 239 RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 511 RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYAIK Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPVRKYAIK 122
BLAST of DC887408 vs. ExPASy Swiss-Prot
Match: RL35_BOVIN (60S ribosomal protein L35 OS=Bos taurus GN=RPL35 PE=2 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.345e-28 Identity = 61/91 (67.03%), Postives = 79/91 (86.81%), Query Frame = -3 Query: 239 RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKFLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREMYFPMRKYAIK 511 RVAKVTGGA +KLSKI+VVR SIA+VLTVI+Q QK LR+ YK KK+ PLDLRPKKTRA+RRRL KH+ +LKT++++++E +P+RKYA+K Sbjct: 32 RVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYAVK 122 The following BLAST results are available for this feature:
BLAST of DC887408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887408 ID=DC887408; Name=DC887408; organism=Citrus sinensis; type=EST; length=576bpback to top |