DC887405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.368e-42 Identity = 87/98 (88.78%), Postives = 95/98 (96.94%), Query Frame = -2 Query: 391 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIGTKDDVSAVKKTGCCSA 684 VIMLVGNKADLRHLRAVSTEDA++FAE+ENTFFMETSALESLNVENAFTEVLT+IY+VV RKAL+VGDDPAALPKGQTIN+G KDDVSAVKK GCCS+ Sbjct: 121 VIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPKGQTINVG-KDDVSAVKKVGCCSS 217
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 7.786e-30 Identity = 66/98 (67.35%), Postives = 83/98 (84.69%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALP-KGQTINIGTKDDVSAVKKTGCCS 684 V+MLVGNK+DLRHL AV T++ ++FAE+E+ +FMETSALES NVENAF EVLTQIYR+VS+++++ GDD + P KG+ INI KDDVSAVKK GCCS Sbjct: 121 VVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGPGKGEKINI--KDDVSAVKKGGCCS 216
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 65/101 (64.36%), Postives = 83/101 (82.18%), Query Frame = -2 Query: 391 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPA---ALPKGQTINIGTKDDVSAVKKTGCCSA 684 V+ML+GNK+DLRHL AVST++A+ AE+E +FMETSALE+ NVENAFTE LTQIYR+VS+KA++ GD+ A A PKG+TINI KD+ S+ KK GCCS+ Sbjct: 120 VVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDEGATSSAPPKGETINI--KDEGSSWKKFGCCSS 218
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.124e-28 Identity = 65/100 (65.00%), Postives = 83/100 (83.00%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGD--DPAALP-KGQTINIGTKDDVSAVKKTGCCS 684 V+ML+GNK+DLRHL AV TED +SFAE+E+ +FMETSALE+ NVENAFTEVLTQIYR+VS++A++ GD + LP KGQTIN+ K+D S +K+ GCCS Sbjct: 120 VVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTINV--KEDSSVLKRFGCCS 217
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.918e-28 Identity = 66/98 (67.35%), Postives = 80/98 (81.63%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALP-KGQTINIGTKDDVSAVKKTGCCS 684 V+MLVGNK+DLRHL AV TEDA+SFAEKE+ +FMETSALE+ NVENAF EVLTQI+ +VS+KA++ + A +P KG I+IG DVSAVKK GCCS Sbjct: 120 VVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKIDIG--KDVSAVKKGGCCS 215
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.623e-27 Identity = 62/98 (63.27%), Postives = 81/98 (82.65%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDD-PAALPKGQTINIGTKDDVSAVKKTGCCS 684 V+MLVGNK+DLRHL AV TED +S+AE+E+ FMETSALE+ NVE+AF EVLTQIYR+ S+K ++ G+D A++PKG+ I + K+DVSA+KK GCCS Sbjct: 120 VVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEV--KNDVSALKKLGCCS 215
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.623e-27 Identity = 60/98 (61.22%), Postives = 83/98 (84.69%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALP-KGQTINIGTKDDVSAVKKTGCCS 684 V+ML+GNK DLRHL AV TE+A++FAE+E+ +FMETSAL++ NVENAFTEVLTQI+++VS++++D G + A LP KG+TIN+ K+D S +K+ GCCS Sbjct: 120 VVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINV--KEDGSVLKRMGCCS 215
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.999e-26 Identity = 59/100 (59.00%), Postives = 79/100 (79.00%), Query Frame = -2 Query: 394 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAAL---PKGQTINIGTKDDVSAVKKTGCCS 684 V+ML+GNK+DLRHL VSTED ++FAEKE+ +FMETSALE+ NVENAF+EVLTQIYR+VS++A++ GD P+ +GQTIN+ +D S + + CCS Sbjct: 120 VVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINV--NEDSSVLNRYRCCS 217
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.804e-22 Identity = 53/100 (53.00%), Postives = 75/100 (75.00%), Query Frame = -2 Query: 391 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKAL--DVGDDPAALPKGQTINIGTKDDVSAVKKTGCCSA 684 VIML+GNK DL+HLRAV+TEDAQS+AEKE F+ETSALE+LNVE AF +L+++YR++S+K++ D A + +GQTI++ + +A K CCS+ Sbjct: 119 VIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTIDVAATSESNA--KKPCCSS 216
BLAST of DC887405 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.739e-21 Identity = 53/97 (54.64%), Postives = 71/97 (73.20%), Query Frame = -2 Query: 397 VIMLVGNKADLRHLRAVSTEDAQSFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDPAALPKGQTINIG-TKDDVSAVKKTGCC 684 VIMLVGNK DL HLRAVSTE+AQ+FA + N F+ETSA+++ NVE AF VLT+I+R+VS ++L+ GDD GQT+NI T +D++ K + C Sbjct: 117 VIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSSQC 213 The following BLAST results are available for this feature:
BLAST of DC887405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887405 ID=DC887405; Name=DC887405; organism=Citrus sinensis; type=EST; length=685bpback to top |