DC887351

Overview
NameDC887351
Unique NameDC887351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length228
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1793 contig Csv1_Contig1793:449..676. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of DC887351 vs. ExPASy Swiss-Prot
Match: GLRX_SOLLC (Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.580e-11
Identity = 29/35 (82.86%), Postives = 34/35 (97.14%), Query Frame = -1 
Query:  124 IGGKHIGGCDSTTALHREGKLVPLLTEAGAVARTA 228
            IG KHIGGCD+TTALHREGKL+PLLTEAGA+A+T+
Sbjct:   72 IGRKHIGGCDATTALHREGKLLPLLTEAGAIAKTS 106
The following BLAST results are available for this feature:
BLAST of DC887351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GLRX_SOLLC7.580e-1182.86Glutaredoxin OS=Solanum lycopersicum PE=3 SV=1[more]
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Properties
Property NameValue
Genbank descriptionDC887351 EIC Citrus sinensis cDNA clone EIC0249 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887351 ID=DC887351; Name=DC887351; organism=Citrus sinensis; type=EST; length=228bp
AAAAATGNTTGGAATTACTCAAATAAGCATAATTTCATATTTAATTCAGA
CAGATTAAGCACTACCAACACATTGTTTATTTATTACTAGCATAAACAGG
CAGAGAATAGCCATCCCTTAGGCAGCTGTCCTGGCAACAGCTCCAGCTTC
AGTGAGCAGAGGAACCAGCTTCCCTTCCCTGTGCAGTGCAGTAGTTGAAT
CGCAGCCACCAATGTGTTTCCCTCCGAT
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