DC887345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887345 vs. ExPASy Swiss-Prot
Match: NIFU1_ARATH (NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.005e-59 Identity = 113/151 (74.83%), Postives = 127/151 (84.11%), Query Frame = -1 Query: 178 AHQFDLTAKNVDLVLEDVRPYLIADGGNIXXXXXXXXXXXVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEVRETTVEAVNGHLDILRPAIKNYGGSVEVLSVESGDCIVKYVGPDSIASGIRAAIKEKFPDIENVVFT 630 A FDLT +NVDLVLEDVRP+LI+DGGN+ +KLQGAC SCPSS+TTM+MGIERVLKEKFGDA+KDIRQV+DEEV++ TVEAVN HLDILRPAIKNYGGSVEVLSVE DC+VKYVGP+SI GI+AAIKEKF DI NV FT Sbjct: 80 AQTFDLTPQNVDLVLEDVRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKFGDALKDIRQVFDEEVKQITVEAVNAHLDILRPAIKNYGGSVEVLSVEGEDCVVKYVGPESIGMGIQAAIKEKFKDISNVTFT 230
BLAST of DC887345 vs. ExPASy Swiss-Prot
Match: NIFU2_ARATH (NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.051e-19 Identity = 59/149 (39.60%), Postives = 85/149 (57.05%), Query Frame = -1 Query: 187 LTAKNVDLVLEDVRPYLIADGGNIXXXXXXXXXXXVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEV-RETTVEAVNGHLDILRP-AIKNYGGSVEVLSVESGDCIVKYVGPDSIASGIRAAI----KEKFPDIENV 615 LT +NV+ VL+++RPYL++DGGN+ VKLQGACGSCPSST TM MGIER L EK + + + + DEE E E + L+ +RP I GS++++ +E ++ GP + +R A+ +EK P I V Sbjct: 85 LTEENVESVLDEIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVA-VEALPDEETGLELNEENIEKVLEEIRPYLIGTADGSLDLVEIEDPIVKIRITGPAAGVMTVRVAVTQKLREKIPSIAAV 232
BLAST of DC887345 vs. ExPASy Swiss-Prot
Match: NIFU1_ORYSJ (NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=NIFU1 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.540e-18 Identity = 61/154 (39.61%), Postives = 84/154 (54.55%), Query Frame = -1 Query: 187 AHQFDLTAKNVDLVLEDVRPYLIADGGNIXXXXXXXXXXXVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEV-RETTVEAVNGHLDILRPAIKNY-GGSVEVLSVESGDCIVKYVGPDSIASGIRAAI----KEKFPDIENV 630 A Q LTA NV+ VL+ VRPYL ADGG++ +KLQGACGSCPSS T+ GIER L EK D + + V D+E E E V L+ +RP + GG ++ L ++ V+ GP ++ +R A+ +EK P I+ V Sbjct: 70 AVQLPLTAGNVESVLDQVRPYLTADGGDVALHEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPD-VAAVEPVTDKETGLELNEENVEKVLNEIRPYLAGTGGGGLQFLMIKGPIVKVRLTGPAAVVRTVRIAVSKKLREKIPSIQIV 222
BLAST of DC887345 vs. ExPASy Swiss-Prot
Match: NIFU3_ARATH (NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.882e-16 Identity = 52/139 (37.41%), Postives = 78/139 (56.12%), Query Frame = -1 Query: 208 LTAKNVDLVLEDVRPYLIADGGNIXXXXXXXXXXXVKLQGACGSCPSSTTTMSMGIERVLKEKFGDAIKDIRQVYDEEV--RETTVEAVNGHLDILRPAIKNY-GGSVEVLSVESGDCIVKYVGPDSIASGIRAAIKEK 615 LT +NV+ VL++VRP L+ADGGN+ +KLQGACGSCPSS+ T+ MGIE L++K + I + Q + E E E + L LRP + GG +E++ ++ V+ GP + +R A+ +K Sbjct: 84 LTEENVERVLDEVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRLRDKIPE-IMSVEQFLESETGGLELNDENIEKVLSELRPYLSGTGGGGLELVEIDGYVVKVRLTGPAAGVMTVRVALTQK 221 The following BLAST results are available for this feature:
BLAST of DC887345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887345 ID=DC887345; Name=DC887345; organism=Citrus sinensis; type=EST; length=630bpback to top |