DC887338

Overview
NameDC887338
Unique NameDC887338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10200 contig Csv1_Contig10200:2169..2723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 254.218 bits (648), Expect = 3.042e-67
Identity = 118/134 (88.06%), Postives = 128/134 (95.52%), Query Frame = -1
Query:  151 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 552
            YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LVDFFEKCK DP++WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLA E
Sbjct:  672 YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.042e-67
Identity = 120/134 (89.55%), Postives = 129/134 (96.27%), Query Frame = -1
Query:  151 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 552
            YEAFGLTVVE+MTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHGEQAA++LVDFFEK KADPS+W KISLGGL+RI EKYTWKIYS+RLLTLTGV  FWKHVSNLDRLESRRY+EMFYALKYRKLAESVPLAVE
Sbjct:  670 YEAFGLTVVESMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGEQAAQLLVDFFEKTKADPSHWAKISLGGLQRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.510e-66
Identity = 118/134 (88.06%), Postives = 128/134 (95.52%), Query Frame = -1
Query:  151 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 552
            YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK K DPS+WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  672 YEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 3.363e-66
Identity = 119/134 (88.81%), Postives = 129/134 (96.27%), Query Frame = -1
Query:  151 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 552
            YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKISLGGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  672 YEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 249.21 bits (635), Expect = 9.786e-66
Identity = 115/132 (87.12%), Postives = 126/132 (95.45%), Query Frame = -1
Query:  157 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 552
            YEAFGLTVVEAMTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHG+QAA+ L DFF KCK DPS+WD+IS GGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLE+RRYLEMFYALKYR LA++VPLA
Sbjct:  674 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLA 805          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 2.847e-65
Identity = 118/134 (88.06%), Postives = 127/134 (94.78%), Query Frame = -1
Query:  151 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 552
            YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKIS GGL+RIEEKYTW IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  672 YEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.148e-64
Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = -1
Query:  157 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 552
            YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQ AE+LV+FFEKCK DPS WD IS GGLKRI+EKYTW+IYS+RLLTL GVYGFWKHVS LDRLE RRYLEMFYALKYRKLAESVPLA
Sbjct:  674 YEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLA 805          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.665e-63
Identity = 112/134 (83.58%), Postives = 123/134 (91.79%), Query Frame = -1
Query:  151 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 552
            YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK DPS+W+ IS+GGLKRIEEKYTW+IYS+ LLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  672 YEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWETISMGGLKRIEEKYTWQIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 7.754e-63
Identity = 111/134 (82.84%), Postives = 123/134 (91.79%), Query Frame = -1
Query:  151 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 552
            YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK +PS+W+ IS GGLKRI+EKYTW+IYS+RLLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  672 YEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKEPSHWETISTGGLKRIQEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of DC887338 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.910e-61
Identity = 110/134 (82.09%), Postives = 123/134 (91.79%), Query Frame = -1
Query:  151 YEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 552
            YEAFGLTVVE+MTCGLPTFATC GGPAEIIV+G SGYHIDPYHG++AAE+LVDFFEK K D ++WD IS GGLKRI EKYTWKIYS+RLLTL GVYGFWK+VSNLDR E++RYLEMFYALKYR LA+SVPLAV+
Sbjct:  673 YEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGYHIDPYHGDKAAELLVDFFEKSKKDQTHWDAISNGGLKRIYEKYTWKIYSERLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVD 806          
The following BLAST results are available for this feature:
BLAST of DC887338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SUSY_SOYBN3.042e-6788.06Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_ALNGL3.042e-6789.55Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_PHAAU1.510e-6688.06Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_VICFA3.363e-6688.81Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUS1_ARATH9.786e-6687.12Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_MEDSA2.847e-6588.06Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS1_DAUCA3.148e-6487.12Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUS1_SOLTU2.665e-6383.58Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUSY_SOLLC7.754e-6382.84Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS2_TULGE1.910e-6182.09Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionDC887338 EIC Citrus sinensis cDNA clone EIC0229 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887338 ID=DC887338; Name=DC887338; organism=Citrus sinensis; type=EST; length=552bp
CCAANGGAAAAAAAAATAAAAAAAAAGAAAATTTAAANCGGTAAAAAAAG
TCTTNNNCCAATCGCAATCCCAAAANGGACATTATTCTCCACAACTCGAG
AAATCTCCACTCGGACCAACCACCCTGAGAGCTTCCTCAATGTCCATTTA
CTCCACAGCCAGAGGAACAGATTCAGCCAGCTTACGGTACTTGAGAGCAT
AAAACATTTCAAGGTATCGACGGCTCTCAAGCCGATCAAGGTTAGATACA
TGTTTCCAGAACCCATAGACTCCAGTCAGGGTCAGAAGCCTCTGAGAGTA
AATTTTCCATGTATACTTCTCTTCAATACGCTTCAGGCCACCCAGTGATA
TCTTGTCCCAGTATGAGGGATCTGCCTTGCACTTCTCAAAGAAGTCAACA
AGGATCTCAGCAGCCTGCTCACCATGGTAAGGATCAATGTGGTANCCAGA
TTTCCCGTTAACGATAATCTCAGCGGGGCCACCCTTGCAAGTTGCAAATG
TTGGCAATCCACAGGTCATGGCCTCAACAACAGTCAAGCCAAAGGCCTCA
TA
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