DC887321

Overview
NameDC887321
Unique NameDC887321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length606
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DC887321 vs. ExPASy Swiss-Prot
Match: Y4634_ARATH (Uncharacterized zinc finger protein At4g06634 OS=Arabidopsis thaliana GN=At4g06634 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.117e-22
Identity = 52/96 (54.17%), Postives = 61/96 (63.54%), Query Frame = 2 
Query:  326 QNAAMEVPRYATPPERITKTPKPPAGVYGSASSERPYACPYEGCEKAYIHEYKLKLHLKREHPGHM-----SXXXXXXXXXXXXXXMDEGSDQDAY 598
            +N   E P+Y  P E++ +T K PA V G  SS+RPYACPYEGCEKAYIHEYKLKLHLKREHPGH+                    +D+GSDQD Y
Sbjct:  195 KNGGGETPKYTPPAEKVLRTVKTPATVCGP-SSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHLQEENADTPTLNKHNGNDRNEIDDGSDQDVY 289
The following BLAST results are available for this feature:
BLAST of DC887321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4634_ARATH2.117e-2254.17Uncharacterized zinc finger protein At4g06634 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionDC887321 EIC Citrus sinensis cDNA clone EIC0196 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887321 ID=DC887321; Name=DC887321; organism=Citrus sinensis; type=EST; length=606bp
GNTTTCNCTTTAGTATGGCCATAGTACAAATGGTTATTATAATCACTGAA
AGATTTAGTACAGAAACCATCTGCTATTTTTCTTCAAACTCTTAAGATCA
TCCCATGTGTCGCTGGTTGACTTCACTGTAGATCTAGAATGGTTATCATA
ATTATGTTCTTTTTATTTTTTTTAATTTTATTTGATATACATAGGACATC
AAAATACCATTCTGCCAACATGAATTTTGGAAATTGATTGCCATGAAGCA
AAGATCATCTGTATATATTTTTTCTCTCAAAACTCGTATATCATATCTGA
TTCTTAGTTTCGAGATTTGATTTCTCAGAATGCTGCAATGGAGGTGCCCA
GATACGCTACTCCTCCCGAGAGGATAACAAAAACTCCCAAGCCACCTGCT
GGGGTTTATGGTTCTGCATCATCTGAACGTCCTTATGCATGTCCTTATGA
AGGGTGTGAAAAGGCATATATCCATGAATACAAGCTTAAACTCCATCTGA
AGCGGGAGCATCCCGGCCATATGTCTGATGAAAATGCCGAGAATGCCACA
ACAAATGCTGATAATGAGATGGATGAAGGCAGTGACCAAGATGCCTATGC
CGGAAA
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