DC887313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.991e-38 Identity = 82/134 (61.19%), Postives = 103/134 (76.87%), Query Frame = -1 Query: 160 TRSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESV--RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 543 TRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIR S RR+TSRI+LPEK+Y+TD+IKAEMKNGVLKV +PK+KE+ER ++ + VD Sbjct: 77 TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNIRHINVD 210
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.755e-37 Identity = 77/131 (58.78%), Postives = 97/131 (74.05%), Query Frame = -1 Query: 160 TRSLSQVLNFMDQMTENPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 543 TRS+ Q++N MDQ+ ENPF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ E RRY+SRI+L LY+ D IKAEMKNGVLKVTVPK+KEEE+ DVFQV VD Sbjct: 74 TRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVMVD 204
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.092e-36 Identity = 82/129 (63.57%), Postives = 98/129 (75.97%), Query Frame = -1 Query: 160 RSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXE--SVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 540 RSLSQVLN +D +T+NP S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+ + S RR++SRIDLPEKLY+ D IKAEMKNGVLKVTVPK+KEEER +V VKVD Sbjct: 77 RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKVD 202
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.434e-36 Identity = 81/136 (59.56%), Postives = 99/136 (72.79%), Query Frame = -1 Query: 160 TRSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESV----RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 543 TRS+SQVLN MDQ ENP S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIR E RR+TSRI LP+K+Y+ D+IKAEMKNGVLKV +PK+KE+ER DV Q++++ Sbjct: 75 TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDVRQIEIN 210
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.354e-35 Identity = 68/100 (68.00%), Postives = 82/100 (82.00%), Query Frame = -1 Query: 160 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 459 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+ ES RRYTSRIDLP+KLY+ DQI+AEMKNGVLKV VPK+KEEER DV VKV+ Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDVISVKVE 211 HSP 2 Score: 27.335 bits (59), Expect = 8.354e-35 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = -3 Query: 491 CV*SIFTNKEPEPGPELHGSDDGES 565 CV SIF++ E EPG E G G+S Sbjct: 72 CVGSIFSDSEFEPGSEHDGPGHGQS 96
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.186e-28 Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = -1 Query: 160 RSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 540 +SL ++L+ MD + P LRRGW+AKE+++AL+L +DMPGLGKE V+V EQN+LVI+ E RY+ RI+L ++YR DQIKAEMKNGVLKV VPKVKEE+R DVFQV V+ Sbjct: 93 QSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQRRDVFQVNVE 220
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.385e-23 Identity = 67/135 (49.63%), Postives = 82/135 (60.74%), Query Frame = -1 Query: 160 SLSQVLNFM-DQMTENPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXESVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 537 SL ++L M D GT G RRG W AKE DDA++L + MPGLGKE V+V EQN+LVI+ RYT RI+LP ++ D+IKAEMKNGVL+V VPK+KEEER DVFQV V+ Sbjct: 114 SLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEEERKDVFQVNVE 248
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.530e-17 Identity = 53/136 (38.97%), Postives = 78/136 (57.35%), Query Frame = -1 Query: 166 RSLSQVLNFMDQMTEN--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 540 R++ Q+L+ MD+M E+ P RGG +R WD KE + + + DMPGL KEDV++S+E N LVI + SV Y +R+ LP+ + D+IKAE+KNGVL +T+PK K E + Q++ Sbjct: 93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 52/136 (38.24%), Postives = 78/136 (57.35%), Query Frame = -1 Query: 166 RSLSQVLNFMDQMTENPF-FSGTR---GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXESVRRYTS---RIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 540 RS+ Q+L+ MD++ E+ F G G +R WD K+ + + + DMPGL KEDV+VS+E + LVI + S R Y+S R+ LP+ + D++KAE+KNGVL +T+PK K E + QV+ Sbjct: 47 RSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181
BLAST of DC887313 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.093e-15 Identity = 45/135 (33.33%), Postives = 81/135 (60.00%), Query Frame = -1 Query: 166 RSLSQVLNFMDQMTENPF-FSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI-----RXXXXXXXXXXESVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 540 R++ Q+++ MD++ E+ F G+R G +R WD K+ ++ + + DMPGL KE+V+VS+E + LVI + + Y +R+ LP+ + + D++KAE+KNGVL +++PK K E++ ++K Sbjct: 108 RTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241 The following BLAST results are available for this feature:
BLAST of DC887313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887313 ID=DC887313; Name=DC887313; organism=Citrus sinensis; type=EST; length=675bpback to top |