DC887303

Overview
NameDC887303
Unique NameDC887303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7608 contig Csv1_Contig7608:494..1211. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 362.459 bits (929), Expect = 1.318e-99
Identity = 168/187 (89.84%), Postives = 176/187 (94.12%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            LVLNKNIDNFFAENEQLAFCPAIVVPGIYYS+DKLLQTRIFSY+DTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEEI+YFPSRYDPVRHAEM P PP +C GRREKCII KENNFKQPGERYRSWA DRQERFICRWVDALSDPRVTHEIR IWISYWSQA KS+GQKLAS LNVRP+I
Sbjct:  306 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA2_ARATH (Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV=3)

HSP 1 Score: 350.132 bits (897), Expect = 6.767e-96
Identity = 157/187 (83.96%), Postives = 177/187 (94.65%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            +VLNKNIDNFFAENEQLAFCPAI+VPGI+YS+DKLLQTR+FSYADTQRHRLGPNYLQLPVNAPKCA HNNH++GFMNFMHRDEE++YFPSRYD VRHAE +PTPP +C G+RE+CII KENNFK+PGERYR++ P+RQERFI RW+DALSDPR+THEIR IWISYWSQA KSLGQKLASRLNVRP+I
Sbjct:  306 MVLNKNIDNFFAENEQLAFCPAIIVPGIHYSDDKLLQTRVFSYADTQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDQVRHAEKYPTPPAVCSGKRERCIIEKENNFKEPGERYRTFTPERQERFIQRWIDALSDPRITHEIRSIWISYWSQADKSLGQKLASRLNVRPSI 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA_SOLAP (Catalase OS=Soldanella alpina PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 1.969e-95
Identity = 156/187 (83.42%), Postives = 175/187 (93.58%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            LVLNKNIDNFFAENEQLAFCPA++VPG+YYS+DKLLQTRIFSYADTQRHRLGPNYLQLP NAPKCA HNNH++G MNFMHRDEE++YFPSR+DPVRHAE HP PP +  G+R++C+I KENNFKQPGERYR++APDRQERF+CRWVDALSDPRVTHEIR IWISYW+QA KSLGQKLASRLNVRP +
Sbjct:  306 LVLNKNIDNFFAENEQLAFCPALIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPPNAPKCAHHNNHHEGLMNFMHRDEEVNYFPSRFDPVRHAERHPIPPPVLTGKRDRCMIEKENNFKQPGERYRTFAPDRQERFVCRWVDALSDPRVTHEIRSIWISYWTQADKSLGQKLASRLNVRPTM 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 1.969e-95
Identity = 157/187 (83.96%), Postives = 173/187 (92.51%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            +VLNKNIDNFFAENEQLAFCPAI+VPG+YYS+DKLLQTR+FSYADTQRHRLGPNYLQLP NAPKCA HNNH+DGFMNFMHRDEE++YFPSRYDPVRHAE  P PP I GG+REKC+I KENNFKQPGERYRSW  DRQERF+ RWVDALSDPRVTHEIR IWISYWSQA +SLGQK+AS LN++P+I
Sbjct:  306 MVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 348.206 bits (892), Expect = 2.572e-95
Identity = 158/187 (84.49%), Postives = 172/187 (91.98%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            LVLNKNIDNFFAENEQLAFCPAIVVPG+YYS+DK+LQTRIFSYAD+QRHRLGPNYLQLP NAPKCA HNNH++GFMNF+HRDEE++YFPSRYDPVRHAE  P PP IC GRREKC I KENNFKQPGERYRSWAPDRQ+RF  RWVDALSDPRVTHEIR +WISYWSQA +SLGQK+AS L+ RPNI
Sbjct:  306 LVLNKNIDNFFAENEQLAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 3.359e-95
Identity = 156/187 (83.42%), Postives = 173/187 (92.51%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            +VLNKNIDNFFAENEQLAFCPAI+VPG+YYS+DKLLQTRIFSYADTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEE++YFPSR+DP RHAE +P PP +C G+RE+CII KENNFK+PGERYRSW PDRQERF+ RWVDALSD RVTHEIR IWISYWSQA +SLGQKLAS LNVRP+I
Sbjct:  306 MVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 1.276e-94
Identity = 156/187 (83.42%), Postives = 172/187 (91.98%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            +VLNKNIDNFFAENEQLAFCPAI+VPG+YYS+DKLLQTRIFSYADTQRHRLGPNYLQLP N+PKCA HNNH+DGFMNFMHRDEE++YFPSRYDPVRHAE  P PP   GG+REKC+I KENNFKQPGERYRSW  DRQERF+ RWVDALSDPRVTHEIR IWISYWSQA +SLGQK+AS LN++P+I
Sbjct:  306 MVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.667e-94
Identity = 157/187 (83.96%), Postives = 174/187 (93.05%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            +VLNKNIDNFFAENEQLAFCP+++VPGIYYS+DKLLQTRIFSY+DTQRHRLGPNYLQLP NAPKCA HNNH++GFMNFMHRDEE++YFPSRYDPVRHAE HP P  +  G+REKCII KENNFKQPGERYRS++ DRQERFI RW+DALSDPRVTHEIR IWISYWSQA KSLGQK+ASRLNVRP+I
Sbjct:  306 MVLNKNIDNFFAENEQLAFCPSLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA3_NICPL (Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN=CAT3 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 4.850e-94
Identity = 157/187 (83.96%), Postives = 172/187 (91.98%), Query Frame = -2
Query:  157 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPNI 717
            LVLNKNIDNFFAENEQLAF PAIVVPG+Y S+DKLLQTRIFSY+D QRHRLGPNYLQLPVNAPKCA HNNH++GFMNFMHRDEE++YFPSR+DP RHAE +P PP +  G+R+KCII KENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIR IW SYWSQA K+LGQK+ASRLNVRP +
Sbjct:  306 LVLNKNIDNFFAENEQLAFWPAIVVPGVYCSDDKLLQTRIFSYSDAQRHRLGPNYLQLPVNAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPCRHAEQYPIPPCVLTGKRDKCIIEKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRSIWFSYWSQADKTLGQKIASRLNVRPTM 492          
BLAST of DC887303 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.843e-93
Identity = 157/186 (84.41%), Postives = 170/186 (91.40%), Query Frame = -2
Query:  160 LVLNKNIDNFFAENEQLAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 717
            LVLNKNIDNFFAENEQLAFCPAI+VPGIYYS+DKLLQTRIFSY+DTQRHRLGPNYLQLP NAPKCA HNNHYDGFMNFMHRDEEIDYFPSRYDP RHAE +P PP    G+R+KC+I KENNFKQPGERYRS++PDRQERFI R V  LSDPRVTHE+R IW+SYWSQA KSLGQK+ASRLNV+PN
Sbjct:  306 LVLNKNIDNFFAENEQLAFCPAIIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHYDGFMNFMHRDEEIDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERYRSFSPDRQERFINRVVGGLSDPRVTHEVRSIWVSYWSQADKSLGQKIASRLNVKPN 491          
The following BLAST results are available for this feature:
BLAST of DC887303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATA1_GOSHI1.318e-9989.84Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA2_ARATH6.767e-9683.96Catalase-2 OS=Arabidopsis thaliana GN=CAT2 PE=1 SV... [more]
CATA_SOLAP1.969e-9583.42Catalase OS=Soldanella alpina PE=2 SV=1[more]
CATA1_SOYBN1.969e-9583.96Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA4_SOYBN2.572e-9584.49Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA1_CUCPE3.359e-9583.42Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA3_SOYBN1.276e-9483.42Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA2_GOSHI1.667e-9483.96Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA3_NICPL4.850e-9483.96Catalase isozyme 3 OS=Nicotiana plumbaginifolia GN... [more]
CATA_HELAN1.843e-9384.41Catalase OS=Helianthus annuus PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionDC887303 EIC Citrus sinensis cDNA clone EIC0166 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887303 ID=DC887303; Name=DC887303; organism=Citrus sinensis; type=EST; length=718bp
CATCATGTTTATGAATTACAGGACCAACATGTTTTTTTTAGTATTACAAA
ATAACACACCACCCGAAAACGAATTCGCATTCCTTAAACTGCTGACGTCC
TCTGTGTTTACTCCTTGCTAACTCTTTCTAAATCACTCAGCTCCGCATCA
CCATTAAATGTTAGGCCTCACATTCAGACGAGATGCCAACTTCTGACCCA
GAGACTTGCAAGCCTGAGACCAGTATGAGATCCATATGTGGCGGATCTCA
TGGGTGACGCGTGGATCAGATAAAGCATCAACCCATCTGCAGATGAATCG
CTCTTGCCTGTCTGGTGCCCAAGATCGGTATCTCTCTCCAGGTTGTTTGA
AGTTGTTTTCCTTTGGAATTATGCACTTCTCGCGCCTTCCGCCGCAGATT
TCAGGAGGAGTTGGATGCATCTCAGCATGACGGACAGGATCATACCTTGA
AGGGAAGTAATCGATCTCCTCATCCCTGTGCATGAAATTCATGAAACCGT
CATAATGATTGTTGTGCTGAGCACATTTGGGTGCATTTACTGGGAGTTGA
AGATAGTTCGGCCCTAGACGGTGCCTCTGAGTATCAGCATAGGAGAAGAT
TCGAGTCTGGAGCAACTTATCATTTGAATAGTAGATGCCAGGAACCACAA
TAGCAGGGCAGAAAGCAAGCTGTTCATTCTCTGCAAAGAAGTTATCAATG
TTCTTGTTCAAAACCAAC
back to top