DC887290

Overview
NameDC887290
Unique NameDC887290
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5595 contig Csv1_Contig5595:1..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC887290 vs. ExPASy Swiss-Prot
Match: AHP5_ARATH (Histidine-containing phosphotransfer protein 5 OS=Arabidopsis thaliana GN=AHP5 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.913e-20
Identity = 52/142 (36.62%), Postives = 85/142 (59.86%), Query Frame = 2
Query:   23 MVGTSLQQELNNFVRSLREQGILDHNFDTLSRIQNDQSPLFVTEVINLFTRDAENAITQARDSLQEP-SVDYDKLIAAVHQLRGASSSIGGCRVALACRELRSAIDDKDKERCNEILQRIVEEYQTLHVNLAHILNLGRQIL 445
            +V   LQ++  +++ SL +QG LD+ F  L ++Q++ +P FV EV++LF  D    I     SL+ P +VD+ ++ + VHQL+G+SSS+G  RV   C   +   D +++E C   LQ++  EY+ L   L  + NL +QIL
Sbjct:    4 IVVAQLQRQFQDYIVSLYQQGFLDNQFSELRKLQDEGTPDFVAEVVSLFFDDCSKLINTMSISLERPDNVDFKQVDSGVHQLKGSSSSVGARRVKNVCISFKECCDVQNREGCLRCLQQVDYEYKMLKTKLQDLFNLEKQIL 145          
BLAST of DC887290 vs. ExPASy Swiss-Prot
Match: AHP1_ARATH (Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.494e-19
Identity = 50/136 (36.76%), Postives = 83/136 (61.03%), Query Frame = 2
Query:   41 QQELNNFVRSLREQGILDHNFDTLSRIQNDQSPLFVTEVINLFTRDAENAITQARDSLQEPSVDYDKLIAAVHQLRGASSSIGGCRVALACRELRSAIDDKDKERCNEILQRIVEEYQTLHVNLAHILNLGRQILA 448
            Q+ L ++ +SL  +GILD  F  L ++Q++ +P FV++V+ LF +D++  +     SL +  VD+ K+   VHQL+G+SSSIG  RV  AC   RS  + ++ E C+  LQ++ +EY  +   L  +  L +QI+A
Sbjct:    7 QKSLQDYTKSLFLEGILDSQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILNDLSLSLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQVKQEYYLVKNRLETLFKLEQQIVA 142          
BLAST of DC887290 vs. ExPASy Swiss-Prot
Match: AHP3_ARATH (Histidine-containing phosphotransfer protein 3 OS=Arabidopsis thaliana GN=AHP3 PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.175e-19
Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = 2
Query:   38 LQQELNNFVRSLREQGILDHNFDTLSRIQNDQSPLFVTEVINLFTRDAENAITQARDSL-QEPSVDYDKLIAAVHQLRGASSSIGGCRVALACRELRSAIDDKDKERCNEILQRIVEEYQTLHVNLAHILNLGRQIL 445
            LQ+   +F  SL  QG LD  F  L ++Q++ SP FV EV+ LF  D E  I+    +L Q  +VD+  + ++VHQL+G+SSS+G  RV   C  L+   D ++ E C   LQ++  EY+TL   L  + NL +QI+
Sbjct:    8 LQRRFCDFTISLYHQGFLDDQFTELKKLQDECSPDFVAEVVTLFFEDCEKLISNMARALDQTGNVDFKLVGSSVHQLKGSSSSVGAKRVKGLCVTLKECCDSQNYEGCVRCLQQVDIEYKTLKAKLQDLFNLEQQIV 144          
BLAST of DC887290 vs. ExPASy Swiss-Prot
Match: AHP2_ARATH (Histidine-containing phosphotransfer protein 2 OS=Arabidopsis thaliana GN=AHP2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.175e-19
Identity = 51/137 (37.23%), Postives = 81/137 (59.12%), Query Frame = 2
Query:   38 LQQELNNFVRSLREQGILDHNFDTLSRIQNDQSPLFVTEVINLFTRDAENAITQARDSLQEP-SVDYDKLIAAVHQLRGASSSIGGCRVALACRELRSAIDDKDKERCNEILQRIVEEYQTLHVNLAHILNLGRQIL 445
            LQ++  ++  SL +QG LD  F  L ++Q+D SP FV+EV++LF  D    I+    +L    +VD+ ++ A+VHQL+G+SSS+G  RV   C   +   + K+ E C   LQ++  EY+ L   L  + NL +QI+
Sbjct:    8 LQRQFRDYTISLYQQGFLDDQFTELKKLQDDGSPDFVSEVLSLFFEDCVKLISNMARALDTTGTVDFSQVGASVHQLKGSSSSVGAKRVKTLCVSFKECCEAKNYEGCVRCLQQVDIEYKALKTKLQDMFNLEKQII 144          
BLAST of DC887290 vs. ExPASy Swiss-Prot
Match: HP1_ORYSJ (Histidine-containing phosphotransfer protein 1 OS=Oryza sativa subsp. japonica GN=HP1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.937e-17
Identity = 47/143 (32.87%), Postives = 80/143 (55.94%), Query Frame = 2
Query:   23 MVGTSLQQELNNFVRSLREQGILDHNFDTLSRIQNDQ-SPLFVTEVINLFTRDAENAITQARDSLQEPSVDYDKLIAAVHQLRGASSSIGGCRVALACRELRSAIDDKDKERCNEILQRIVEEYQTLHVNLAHILNLGRQILA 448
            M   +L+ +L   + S+  QG++D  F  L  +Q++  +P FV+EV+ LF  DA+  I +    L++P V++DK+ A VHQL+G+S+S+G  +V   C + R    DK ++ C   L  +  ++  L      +L L +QI A
Sbjct:    1 MAAAALRDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINEIATLLEQPVVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVVRNDFYDLRNKFQTMLQLEQQIQA 143          
BLAST of DC887290 vs. ExPASy Swiss-Prot
Match: AHP6_ARATH (Histidine-containing phosphotransfer protein 6 OS=Arabidopsis thaliana GN=AHP6 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.683e-13
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 2
Query:   38 LQQELNNFVRSLREQGILDHNFDTLSRIQNDQSPLFVTEVINLFTRDAENAITQARDSLQEPSV-DYDKLIAAVHQLRGASSSIGGCRVALACRELRSAIDDKDKERCNEILQRIVEEYQTLHVNLAHILNLGRQ 439
            LQ ++N  + SL  QG+LD  F  L ++Q++ SP FV +VIN++  ++E  +   R  L +    DY K+   ++QL G+SSSIG  RV   C   RSA +  ++  C   L+ +  EY  L   +  +  L +Q
Sbjct:    9 LQADINRLLASLFHQGVLDEQFLQLQQLQDETSPNFVYDVINIYFDESEKLLRNLRLLLMDREFSDYKKIGLHLNQLVGSSSSIGARRVRNVCVAFRSASELSNRPGCLRGLEVVEHEYHYLKNMMHELFQLEQQ 143          
BLAST of DC887290 vs. ExPASy Swiss-Prot
Match: AHP4_ARATH (Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 2
Query:   80 QGILDHNFDTLSRIQNDQSPLFVTEVINLFTRDAENAITQARDSLQEPSVDYDKLIAAVHQLRGASSSIGGCRVALACRELRSAIDDKDKERCNEILQRIVEEYQTLHVNLAH 418
            QG LD  F  L  +Q+D +P FV EV  L+ +D+   I     +L+  S D+++L + +HQ +G+S+SIG  +V   C   R      + E C    Q++ +E+ TL   L H
Sbjct:    9 QGYLDEQFMELEELQDDANPNFVEEVSALYFKDSARLINNIDQALERGSFDFNRLDSYMHQFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHSTLRKKLEH 121          
The following BLAST results are available for this feature:
BLAST of DC887290 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
AHP5_ARATH2.913e-2036.62Histidine-containing phosphotransfer protein 5 OS=... [more]
AHP1_ARATH5.494e-1936.76Histidine-containing phosphotransfer protein 1 OS=... [more]
AHP3_ARATH7.175e-1939.42Histidine-containing phosphotransfer protein 3 OS=... [more]
AHP2_ARATH7.175e-1937.23Histidine-containing phosphotransfer protein 2 OS=... [more]
HP1_ORYSJ3.937e-1732.87Histidine-containing phosphotransfer protein 1 OS=... [more]
AHP6_ARATH7.683e-1334.07Histidine-containing phosphotransfer protein 6 OS=... [more]
AHP4_ARATH1.712e-1233.63Histidine-containing phosphotransfer protein 4 OS=... [more]
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Properties
Property NameValue
Genbank descriptionDC887290 EIC Citrus sinensis cDNA clone EIC0142 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887290 ID=DC887290; Name=DC887290; organism=Citrus sinensis; type=EST; length=745bp
TTCTTGAAACAAGAAAAAGAAAATGGTGGGTACCAGCCTTCAGCAAGAGT
TGAACAACTTTGTTCGCTCCCTGCGTGAGCAGGGTATACTGGACCATAAT
TTCGATACCTTGAGCAGAATTCAAAACGATCAGAGTCCTCTGTTTGTTAC
AGAAGTGATCAATTTGTTCACAAGGGATGCTGAAAATGCCATAACACAAG
CTCGTGATTCCCTGCAAGAACCTTCAGTGGACTATGACAAGTTGATAGCT
GCGGTCCATCAACTCAGGGGAGCCAGCTCGAGCATTGGTGGTTGTCGCGT
GGCCCTTGCTTGCCGTGAACTTCGCTCTGCCATTGATGACAAGGACAAGG
AAAGGTGTAATGAAATTCTCCAAAGGATTGTGGAGGAGTACCAAACTTTG
CATGTGAATCTTGCACACATTCTCAATCTTGGGAGGCAAATCCTGGCACT
TCAGAGGGGACAACACCAAGCATAGAGAGCTGGCTTGGTGTCTTTGCTGC
TGGTGGTTCCTCAGCTGAACATCTAAATGGCTGCTTATCATATAGCTTGT
GTTAAATAAAGTTCACCAGAAACTAAACTTGGTGCTCGTTTGAAACTATT
TCGAGTTGGTGTCCTGTTTTATGCTGTGTTTGAACATCGGTGTTGCTTTC
TTGTTTGTTGTTTTTGAACCTAATAACCTGTTTTATGTTGTGTTTGAACA
CCAGTGTCGCTTCTTATTTGCTGTTTTTGAACTTAATGAATAATN
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