DC887289
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.692e-47 Identity = 96/145 (66.21%), Postives = 111/145 (76.55%), Query Frame = -2 Query: 196 TSCLFQAAPRSKKFS--LVKSPGSLGSTRSVSKAFGLKCSS-FKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 621 TSC R+ + S VKSP SL V+K LK S SAMAVYKVKL+GP GEE+EFDAPDDAYI+D+AE G+ELPYSCRAGACSTCAG++ SGSVDQSDGSFLDD Q E+G+VLTCV+YP SDCVI+THKE +LY Sbjct: 8 TSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGDLY 152
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.336e-46 Identity = 86/123 (69.92%), Postives = 109/123 (88.62%), Query Frame = -2 Query: 196 SLGSTRSVSKAFGLKCS--SFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 558 S+GST+ VS++FGLKCS S A+ AVYKVKL+GP+G+E+EF+ DD YI+D+AE+ G++LPYSCRAGACSTCAGQ+VSG+VDQSDGSFL+D +EKG+VLTCVAYP SDCVI+THKE+EL+ Sbjct: 33 SVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.275e-40 Identity = 73/97 (75.26%), Postives = 86/97 (88.66%), Query Frame = -2 Query: 196 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 486 AVYKVKLIGP GEENEF+ DD +I+D+AE+ G++LPYSCRAGACSTCAGQ+V G VDQS+GSFL+D EKGFVLTCVAYP SDCVI+THKE+EL+ Sbjct: 2 AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETELF 98
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.603e-39 Identity = 79/138 (57.25%), Postives = 105/138 (76.09%), Query Frame = -2 Query: 196 AAPRSKKFSLVKSPGSLGSTRSVSKAFGLKCSS-FKASAMAV-YKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 603 AAP + S G R ++A G + SS F ASA AV +KVKL+GP+G E+EF+APDD YI+++AE G+ELP+SCRAG+CSTCAG+M +G VDQS+GSFLDD QM +G++LTC++YP +DCVI+THKE +LY Sbjct: 24 AAPAANTLSFA------GHARQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDLY 155
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.603e-39 Identity = 72/97 (74.23%), Postives = 85/97 (87.63%), Query Frame = -2 Query: 196 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 486 AVYKVKLIGP+G+ENEFD PDD YI+D+AE+ G++LPYSCRAGACSTCAG++ G VDQSDGSFL+D EKG+VLTCVAYP SD VI+THKE EL+ Sbjct: 2 AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEELF 98
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER1_PEA (Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 7.349e-37 Identity = 81/145 (55.86%), Postives = 103/145 (71.03%), Query Frame = -2 Query: 199 TSCLFQAAPRSKKFSLVKSPGSLGSTRSVSKAF-GLKCSSFK---ASAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 621 T L+ A + P S+ +T++ S F GLK S + A AMA YKVKL+ P+G + EF+ P D YI+D AE+ G++LPYSCRAG+CS+CAG++V G VDQSDGSFLDD+Q+E GFVLTCVAYPTSD VI THKE +L Sbjct: 4 TPALYGTAVSTSFLRTQPMPMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLVTPDGTQ-EFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPTSDVVIETHKEEDL 147
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.879e-35 Identity = 75/144 (52.08%), Postives = 101/144 (70.14%), Query Frame = -2 Query: 199 TSCLFQAAPRSKKFSLVKSPGSLGSTRSVSKA-FGLKCSSFKA--SAMAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 621 T+ A S F+ P + +V +A FGLK S+ + +AMA YKV L+ P G++ E + PDD YI+D+AE+ G++LPYSCRAG+CS+CAG++ SGSV+Q DGSFLDD Q+++G+VLTCVAYPT D I THKE EL Sbjct: 4 TTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASRGRVTAMAAYKVTLVTPEGKQ-ELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEEL 146
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER1_NOSMU (Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 8.984e-35 Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = -2 Query: 196 VYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 483 VYKV L+ G E D PDD YI+D AED G++LPYSCRAGACSTCAG++VSG+VDQSD SFLDD Q+EKG+VLTCVAYPTSD I THKE +LY Sbjct: 4 VYKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQSFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDLY 99
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FER_SYNY4 (Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.173e-34 Identity = 68/98 (69.39%), Postives = 81/98 (82.65%), Query Frame = -2 Query: 196 MAVYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESELY 489 MA Y VKLI P+GE N + DD YI+D+AE+ G++LPYSCRAGACSTCAG++ +GSVDQSD SFLDD Q+E G+VLTCVAYPTSDC I THKE +LY Sbjct: 1 MASYTVKLITPDGE-NSIECSDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEDLY 97
BLAST of DC887289 vs. ExPASy Swiss-Prot
Match: FERA_ALOMA (Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.173e-34 Identity = 67/96 (69.79%), Postives = 82/96 (85.42%), Query Frame = -2 Query: 199 AVYKVKLIGPNGEENEFDAPDDAYIIDSAEDTGMELPYSCRAGACSTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCVIYTHKESEL 486 A YKVKL+ P G++ EFD PDD YI+D AE+ G++LPYSCRAG+CS+CAG++ G VDQSDGSFLDD+QME+G+VLTCVA+PTSD VI THKE EL Sbjct: 1 ATYKVKLVTPQGQQ-EFDCPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVKQGEVDQSDGSFLDDEQMEQGWVLTCVAFPTSDVVIETHKEEEL 95 The following BLAST results are available for this feature:
BLAST of DC887289 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887289 ID=DC887289; Name=DC887289; organism=Citrus sinensis; type=EST; length=631bpback to top |