CN184190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_ARATH (Probable ubiquitin-fold modifier 1 OS=Arabidopsis thaliana GN=At1g77710 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.762e-42 Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = -1 Query: 276 MASGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA 536 MA+GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GINPQQSAGNVFLKHGSELRLIPRDRVGA Sbjct: 1 MATGGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGINPQQSAGNVFLKHGSELRLIPRDRVGA 87
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_ORYSJ (Probable ubiquitin-fold modifier 1 OS=Oryza sativa subsp. japonica GN=Os01g0962400 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.032e-41 Identity = 83/86 (96.51%), Postives = 84/86 (97.67%), Query Frame = -1 Query: 276 ASGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA 533 A GGKVSFK+ LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA Sbjct: 12 AGGGKVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA 97
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_CHLIN (Probable ubiquitin-fold modifier 1 OS=Chlamydomonas incerta GN=PR46a PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.214e-37 Identity = 77/85 (90.59%), Postives = 81/85 (95.29%), Query Frame = -1 Query: 267 KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGASRM 521 KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ+AGNVFLKHGSELRLIPRDRVG S + Sbjct: 13 KVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINPQQTAGNVFLKHGSELRLIPRDRVGGSSL 97
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_CHLRE (Probable ubiquitin-fold modifier 1 OS=Chlamydomonas reinhardtii GN=PR46a PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.868e-37 Identity = 77/88 (87.50%), Postives = 82/88 (93.18%), Query Frame = -1 Query: 279 KKMASGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 542 ++ A+ KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ AGNVFLKHGSELRLIPRDRVG Sbjct: 3 QQAAAVTKVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINPQQIAGNVFLKHGSELRLIPRDRVG 90
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_CAEEL (Probable ubiquitin-fold modifier 1 OS=Caenorhabditis elegans GN=tag-277 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.531e-35 Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = -1 Query: 279 SGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 530 +G KV+FK+TLTSDPKLPFKV SVPE+ PFTAVLKFAAEEFKVP TSAIITNDGVG+NP Q AGN+FLKHGSELRLIPRDRVG Sbjct: 10 AGSKVTFKITLTSDPKLPFKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGVGVNPAQPAGNIFLKHGSELRLIPRDRVG 93
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_CAEBR (Probable ubiquitin-fold modifier 1 OS=Caenorhabditis briggsae GN=CBG12253 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.531e-35 Identity = 72/85 (84.71%), Postives = 78/85 (91.76%), Query Frame = -1 Query: 279 ASGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVG 533 A KV+FK+TLTSDPKLPFKV SVPEAAPFT+VL++AAEEFKVP TSAIITNDGVGINP QSAGN+FLKHGSELRLIPRDRVG Sbjct: 7 APAAKVTFKITLTSDPKLPFKVLSVPEAAPFTSVLRYAAEEFKVPAATSAIITNDGVGINPAQSAGNIFLKHGSELRLIPRDRVG 91
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_RAT (Ubiquitin-fold modifier 1 OS=Rattus norvegicus GN=Ufm1 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.256e-34 Identity = 70/82 (85.37%), Postives = 77/82 (93.90%), Query Frame = -1 Query: 276 KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA 521 KVSFK+TLTSDP+LP+KV SVPE+ PFTAVLKFAAEEFKVP TSAIITNDG+GINP Q+AGNVFLKHGSELRLIPRDRVG+ Sbjct: 3 KVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRLIPRDRVGS 84
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_PONAB (Ubiquitin-fold modifier 1 OS=Pongo abelii GN=UFM1 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.143e-34 Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = -1 Query: 276 KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA 521 KVSFK+TLTSDP+LP+KV SVPE+ PFTAVLKFAAEEFKVP TSAIITNDG+GINP Q+AGNVFLKHGSELR+IPRDRVG+ Sbjct: 3 KVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRDRVGS 84
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_MOUSE (Ubiquitin-fold modifier 1 OS=Mus musculus GN=Ufm1 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.143e-34 Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = -1 Query: 276 KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA 521 KVSFK+TLTSDP+LP+KV SVPE+ PFTAVLKFAAEEFKVP TSAIITNDG+GINP Q+AGNVFLKHGSELR+IPRDRVG+ Sbjct: 3 KVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRDRVGS 84
BLAST of CN184190 vs. ExPASy Swiss-Prot
Match: UFM1_MACFA (Ubiquitin-fold modifier 1 OS=Macaca fascicularis GN=UFM1 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.143e-34 Identity = 69/82 (84.15%), Postives = 77/82 (93.90%), Query Frame = -1 Query: 276 KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGA 521 KVSFK+TLTSDP+LP+KV SVPE+ PFTAVLKFAAEEFKVP TSAIITNDG+GINP Q+AGNVFLKHGSELR+IPRDRVG+ Sbjct: 3 KVSFKITLTSDPRLPYKVLSVPESTPFTAVLKFAAEEFKVPAATSAIITNDGIGINPAQTAGNVFLKHGSELRIIPRDRVGS 84 The following BLAST results are available for this feature:
BLAST of CN184190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CN184190 ID=CN184190; Name=CN184190; organism=Citrus sinensis; type=EST; length=575bpback to top |