CX676549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.381e-52 Identity = 102/184 (55.43%), Postives = 130/184 (70.65%), Query Frame = -1 Query: 235 SMELKSLAMNLILKMGKVLNIKDQEMRNFFEN--GMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENTPSLFRRLTVXXXXXXXXXXXLSGKSYLDVLRI 780 S E++S+A LI KM + L IK +E+ F++ +Q MRMNYYPPCPQP++V+GLTPHSD GLT+L+Q+N+VEGLQIKKD W+P+ PLPNAF+VN+GD++EIITNG YRSIEHR VNS ER SIA F+ EV PA SL+ + F+RLT+ L GK+YLD LRI Sbjct: 175 SSEVQSVAKILIAKMARALEIKPEELEKLFDDVDSVQSMRMNYYPPCPQPDQVIGLTPHSDSVGLTVLMQVNDVEGLQIKKDGKWVPVKPLPNAFIVNIGDVLEIITNGTYRSIEHRGVVNSEKERLSIATFHNVGMYKEVGPAKSLVERQKVARFKRLTMKEYNDGLFSRTLDGKAYLDALRI 358
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.832e-29 Identity = 73/186 (39.25%), Postives = 109/186 (58.60%), Query Frame = -1 Query: 235 SMELKSLAMNLILKMGKVLNIKDQ----EMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENTPSLFRRLTVXXXXXXXXXXXLSGKSYLDVLRI 780 SMEL+ +AM L M K L ++ + +R F +++ P + +GL+PHSD GLT+L+Q+NEV GL IKKD W+P+ P+ AFVVN+GD++EI++NG Y+SIEHRA +N+ ER SIAAF+ Y ++ P L+ EN ++ + L GKS LD +++ Sbjct: 173 SMELQKVAMCLTGMMAKNLGLESEILTKPLRTVFNREDELL-----PSMSSCGEGLGLSPHSDATGLTLLIQVNEVNGLHIKKDEKWVPIKPILGAFVVNIGDVIEIMSNGIYKSIEHRAVINTDKERLSIAAFHDPEYGTKIGPLPDLVKENGVK-YKTIDYEDYLIRSSNIKLDGKSLLDQMKL 352
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.030e-27 Identity = 60/142 (42.25%), Postives = 87/142 (61.27%), Query Frame = -1 Query: 349 ELKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASS 774 E+K L++ ++ + L ++ R FF + +MR NYYPPCP+PE+ +G PH D LTILLQ ++V GL++ D W P++P+P A V+N+GD ++NG+Y+S HRA VN ER S+A F R D V P S Sbjct: 195 EMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPS 335
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.030e-27 Identity = 60/142 (42.25%), Postives = 87/142 (61.27%), Query Frame = -1 Query: 349 ELKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASS 774 E+K L++ ++ + L ++ R FF + +MR NYYPPCP+PE+ +G PH D LTILLQ ++V GL++ D W P++P+P A V+N+GD ++NG+Y+S HRA VN ER S+A F R D V P S Sbjct: 195 EMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRPPPS 335
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.528e-26 Identity = 66/185 (35.68%), Postives = 99/185 (53.51%), Query Frame = -1 Query: 235 SMELKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFY--YARYDGEVY-PASSLISENTPSLFRRLTVXXXXXXXXXXXLSGKSYLDVLRI 780 S E+ L L + + L + +++ ++ +YYPPCPQP+ +GLT HSD LTILLQ + + GLQ+ D+ W+ + P+P A VVNVGD++++ITN K+ S+EHR N R S+A F+ Y + VY P ++SE P +R T+ G S L L+I Sbjct: 182 SKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQ-DHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFYRSKGFDGTSGLLYLKI 365
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.900e-25 Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = -1 Query: 331 LKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENT 771 + SL++ ++ +G L +K R FFE +MR+NYYPPC +P+ +G PH D LTIL Q + V GLQ+ + W + P P AFVVN+GD ++N +Y+S HRA VNS ER S+A F + D V P L+ T Sbjct: 194 MSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQ-DHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSIT 339
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.241e-25 Identity = 59/151 (39.07%), Postives = 94/151 (62.25%), Query Frame = -1 Query: 337 SMELKSLAMNLILKMGKVLNIKDQEMRNFF--ENGMQV-MRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISE 780 +++L+ LA L+ + + L ++ ++ F NG +++ YPPCP PE + GL H+D GL +L Q ++V GLQ+ KD WI + P+ ++ V+N+GD +E+ITNGKYRS+EHR + R SIA+FY D +YPA +L+ + Sbjct: 118 ALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVINLGDQLEVITNGKYRSVEHRVIAQTDGTRMSIASFYNPGSDAVIYPAPTLVEK 268
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.232e-25 Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = -1 Query: 307 ELKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENTPSLFRRLT 774 E+ L++ ++ +G+ L + R FFE +MR+NYYPPC +P + +G PH D LTIL Q N V GLQ+ + W + P +AFVVN+GD ++NG+Y+S HRA VNS R S+A F D V P +L+ + P + T Sbjct: 170 EMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAYPDFT 324
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.528e-25 Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = -1 Query: 340 LKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLIS 771 + +L++ ++ +G L ++ + + FFE+ + R+NYYP C QPE +G PH D LTIL Q ++V GLQ+ D W + P P+AFVVN+GD +TNG+Y+S HRA VNS ER + A F + + V P L++ Sbjct: 193 MNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQ-DQVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELVN 335
BLAST of CX676549 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.528e-25 Identity = 60/156 (38.46%), Postives = 86/156 (55.13%), Query Frame = -1 Query: 307 ELKSLAMNLILKMGKVLNIKDQEMRNFFENGMQVMRMNYYPPCPQPEKVVGLTPHSDGCGLTILLQINEVEGLQIKKDRMWIPLTPLPNAFVVNVGDIMEIITNGKYRSIEHRATVNSVHERHSIAAFYYARYDGEVYPASSLISENTPSLFRRLT 774 E+ L++ ++ +G+ L + R FFE +MR+NYYPPC +P + +G PH D LTIL Q N V GLQ+ + W + P +AFVVN+GD ++NG+Y+S HRA VNS R S+A F D V P +L+ P + T Sbjct: 170 EMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAYPDFT 324 The following BLAST results are available for this feature:
BLAST of CX676549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CX676549 ID=CX676549; Name=CX676549; organism=Citrus sinensis; type=EST; length=780bpback to top |