CX676535

Overview
NameCX676535
Unique NameCX676535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: YOU1_CAEEL (Putative transporter ZK637.1 OS=Caenorhabditis elegans GN=ZK637.1 PE=3 SV=5)

HSP 1 Score: 149.058 bits (375), Expect = 2.271e-35
Identity = 72/215 (33.49%), Postives = 114/215 (53.02%), Query Frame = 3
Query:   63 KSDDEKQTYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            +S D ++T+TVDEA+  +GFG+FQL +    GM W+++AMEMMLLS + PA+   W +S  Q++L+T+ VF+GM++ +  WG + D FGRRKG   + +V    G++S  +P++Y                    + + EF+P   R   +V+ ++FW +G + EA +A+ VM   GWR                    PES R+    G    A
Sbjct:   59 RSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGISSVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGLTFSTLVACIMGVISGMSPHFYVLLFFRGLTGFGIGGVPQSVTLYAEFLPTAQRAKCVVLIESFWAIGAVFEALLAYFVMESFGWRALMFLSSLPLGIFAVASFWLPESARFDMASGHPERA 273          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOP_XENLA (Synaptic vesicle 2-related protein OS=Xenopus laevis GN=svop PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.307e-34
Identity = 76/208 (36.54%), Postives = 108/208 (51.92%), Query Frame = 3
Query:   84 TYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            T+ V++A+  +GFGKFQ  +    G+ W+++AMEMM+LS + P +   W L   Q +L+TSVVF GM+  +  WG VSD +GRR G  I+ I T   G+LSAFAP Y                     + + EF+P  +R   +++ + FW +GT+ E  +A  VMP LGWRW                   PES RY  L G   +A
Sbjct:   67 TFMVEDAVEAIGFGKFQWKLSMLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMASSSLWGNVSDQYGRRTGLKISVIWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKSRAKCILLIEIFWALGTVFEVLLAIFVMPTLGWRWLLILSALPLMLFAILCFWLPESARYEVLSGNQEKA 274          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 3
Query:   84 TYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            T+ V++A+  +GFGKFQ  +    G+ W+++AMEMM+LS + P +   W L   Q +L+TSVVF GM+  +  WG +SD +GR+ G  I+ + T   G+LSAFAP Y                     + + EF+P   R   +++ + FW +GT+ E  +A  VMP LGWRW                   PES RY  L G   +A
Sbjct:   67 TFMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAVLCFWLPESARYDVLSGNQEKA 274          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 3
Query:   84 TYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            T+ V++A+  +GFGKFQ  +    G+ W+++AMEMM+LS + P +   W L   Q +L+TSVVF GM+  +  WG +SD +GR+ G  I+ + T   G+LSAFAP Y                     + + EF+P   R   +++ + FW +GT+ E  +A  VMP LGWRW                   PES RY  L G   +A
Sbjct:   67 TFMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAVLCFWLPESARYDVLSGNQEKA 274          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 3
Query:   84 TYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            T+ V++A+  +GFGKFQ  +    G+ W+++AMEMM+LS + P +   W L   Q +L+TSVVF GM+  +  WG +SD +GR+ G  I+ + T   G+LSAFAP Y                     + + EF+P   R   +++ + FW +GT+ E  +A  VMP LGWRW                   PES RY  L G   +A
Sbjct:   67 TFMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVVLAVFVMPSLGWRWLLILSAVPLLLFAVLCFWLPESARYDVLSGNQEKA 274          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32
Identity = 72/208 (34.62%), Postives = 107/208 (51.44%), Query Frame = 3
Query:   84 TYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            T+ V++A+  +GFG+FQ  +    G+ W+++AMEMM+LS + P +   W L   Q +L+TSVVF GM+  +  WG +SD +GR+ G  I+ + T   G+LSAFAP Y                     + + EF+P   R   +++ + FW +GT+ E  +A  VMP LGWRW                   PES RY  L G   +A
Sbjct:   67 TFMVEDAVEAIGFGRFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVLLAVFVMPSLGWRWLLLLSAAPLLLFAVLCFWLPESARYDVLSGNQEKA 274          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOP_RAT (Synaptic vesicle 2-related protein OS=Rattus norvegicus GN=Svop PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32
Identity = 72/208 (34.62%), Postives = 106/208 (50.96%), Query Frame = 3
Query:   84 TYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            T+ V++A+  +GFG+FQ  +    G+ W+++AMEMM+LS + P +   W L   Q +L+TSVVF GM+  +  WG +SD +GR+ G  I+   T   G+LSAFAP Y                     + + EF+P   R   +++ + FW +GT+ E  +A  VMP LGWRW                   PES RY  L G   +A
Sbjct:   67 TFMVEDAVEAIGFGRFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVALLTSVVFIGMMSSSTLWGNISDQYGRKTGLKISVFWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVLLAVFVMPSLGWRWLLLLSAAPLLVFAVLCFWLPESARYDVLSGNQEKA 274          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOPL_HUMAN (Putative transporter SVOPL OS=Homo sapiens GN=SVOPL PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.022e-27
Identity = 69/229 (30.13%), Postives = 116/229 (50.66%), Query Frame = 3
Query:   27 SIRSLTQSKMGIKSDDEKQ--TYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            +I SL +  +G      K+  T+TV++A+ T+GFG+F + +    G   + EAME+ML++ V P ++  W L   Q +L+T++VF G +V +  +G+++D +GR K  LI+ +  +   LL++FAP+Y                         EF+P   RG+ + + Q FW  G++L  G+A +++P +GWRW                   PES R+    G T  A
Sbjct:   10 TILSLRKLSLGTAEPQVKEPKTFTVEDAVETIGFGRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVALVTTMVFFGYMVFSILFGLLADRYGRWKILLISFLWGAYFSLLTSFAPSYIWFVFLRTMVGCGVSGHSQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIIGLASVIIPTIGWRWLIRVASIPGIILIVAFKFIPESARFNVSTGNTRAA 238          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOPL_MOUSE (Putative transporter SVOPL OS=Mus musculus GN=Svopl PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.130e-26
Identity = 67/235 (28.51%), Postives = 118/235 (50.21%), Query Frame = 3
Query:    3 QEPDLHLSSIRSLTQSKMGIKSDDEKQTYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRYLCLKGRTAEA 707
            Q   + + S+R L+Q+    +  + K T+TV++A+ T+GFG+F + +    G   + EAME+ML++ V P ++  W L   Q + +T++VF G +V +  +G+++D +GR K  L++ +  +   LL++F+P+Y                         EF+P   RG+ + + Q FW  G++L   +A +V+P +GWRW                   PES R+    G T  A
Sbjct:    5 QTEPVTIISLRKLSQAAPEPQQKETK-TFTVEDAVETIGFGRFHIALFLIMGSTGVVEAMEIMLIAVVSPVIRCEWQLENWQVAFVTTMVFFGYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGVSGHAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIISMASVVIPTIGWRWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAA 238          
BLAST of CX676535 vs. ExPASy Swiss-Prot
Match: SVOPL_DANRE (Putative transporter SVOPL OS=Danio rerio GN=svopl PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.867e-21
Identity = 60/201 (29.85%), Postives = 94/201 (46.77%), Query Frame = 3
Query:   75 EKQTYTVDEAIVTMGFGKFQLCVLAYAGMGWISEAMEMMLLSFVGPAVQSLWHLSPNQESLITSVVFAGMLVGAYSWGIVSDNFGRRKGFLITAIVTSAAGLLSAFAPNYYXXXXXXXXXXXXXXXXXXXASWFLEFIPAPNRGFWMVIFQTFWTVGTILEAGIAWLVMPRLGWRWXXXXXXXXXXXXXXXXXVTPESPRY 677
            E + YTV+EA+ ++GFG F + +    G   I EAME+MLL+ V P ++  WHL   Q +L++++VF G +V     G ++D +GR K      +  S    L++F+ +Y                         EFIPA  R + + +   FW +G+IL   +   V+P +GWRW                   PES R+
Sbjct:   45 EPKCYTVEEAVESIGFGCFHILLFVIMGSANIVEAMEIMLLAVVSPEIRCEWHLEDWQVALVSTMVFFGFMVCGVLCGYIADKYGRWKVVFGGFVWASYFSFLTSFSTSYGWFIFLRCMVGCGVAATSQGFVLKTEFIPAKYRAYLLPLASIFWMMGSILIIVLGMTVVPTMGWRWMIRFSVIPSLVLIGLFMFIPESARF 245          
The following BLAST results are available for this feature:
BLAST of CX676535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
YOU1_CAEEL2.271e-3533.49Putative transporter ZK637.1 OS=Caenorhabditis ele... [more]
SVOP_XENLA7.307e-3436.54Synaptic vesicle 2-related protein OS=Xenopus laev... [more]
SVOP_PONAB3.626e-3335.10Synaptic vesicle 2-related protein OS=Pongo abelii... [more]
SVOP_HUMAN3.626e-3335.10Synaptic vesicle 2-related protein OS=Homo sapiens... [more]
SVOP_BOVIN3.626e-3335.10Synaptic vesicle 2-related protein OS=Bos taurus G... [more]
SVOP_MOUSE1.378e-3234.62Synaptic vesicle 2-related protein OS=Mus musculus... [more]
SVOP_RAT2.350e-3234.62Synaptic vesicle 2-related protein OS=Rattus norve... [more]
SVOPL_HUMAN1.022e-2730.13Putative transporter SVOPL OS=Homo sapiens GN=SVOP... [more]
SVOPL_MOUSE1.130e-2628.51Putative transporter SVOPL OS=Mus musculus GN=Svop... [more]
SVOPL_DANRE1.867e-2129.85Putative transporter SVOPL OS=Danio rerio GN=svopl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70E06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70E06-I12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676535 ID=CX676535; Name=CX676535; organism=Citrus sinensis; type=EST; length=717bp
AACAAGAACCAGATCTACATCTCTCTTCCATTCGTAGCTTGACTCAGAGC
AAGATGGGAATTAAAAGTGATGATGAAAAGCAGACATACACAGTTGATGA
AGCTATTGTGACAATGGGATTTGGAAAGTTTCAACTTTGCGTGCTTGCTT
ATGCTGGCATGGGTTGGATTTCAGAAGCAATGGAAATGATGCTCCTCTCA
TTTGTAGGACCAGCAGTTCAGTCTCTATGGCATCTTTCTCCCAATCAAGA
GAGTCTAATTACCAGCGTGGTTTTTGCTGGAATGCTAGTTGGGGCCTATT
CATGGGGCATTGTTTCAGATAATTTTGGAAGAAGGAAAGGATTCCTCATC
ACAGCAATAGTCACTTCTGCAGCAGGTTTACTGAGTGCCTTTGCCCCAAA
TTATTATTTATTGTTATTTTTTCGTTGTTTGGTTGGTCTTGGCTTGGGAG
GCGGTCCTGTACTCGCATCCTGGTTTCTAGAGTTCATTCCTGCTCCAAAC
AGAGGCTTTTGGATGGTTATCTTTCAAACTTTCTGGACTGTTGGGACAAT
CTTAGAAGCTGGAATTGCATGGCTTGTCATGCCAAGATTGGGTTGGAGGT
GGCTACTCGGACTGTCTGCTTTTCCTTCTTCGCTTCTCCTTTTATTGTAT
TCAGTGACACCTGAATCACCAAGGTATTTATGCTTGAAAGGTCGAACAGC
TGAAGCACGTCATGTCT
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