CX676533

Overview
NameCX676533
Unique NameCX676533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length570
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX676533 vs. ExPASy Swiss-Prot
Match: GLTR_ARATH (Uncharacterized glycosyltransferase At3g02350 OS=Arabidopsis thaliana GN=At3g02350 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.183e-24
Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 1 
Query:    1 LGYKRPLWKAGSLPLGWITFYKHTVALDKRWHVLGLGYDSGVARRDIEQAAVIHYDGVMKPWLEIAIAKYKGYWTKFINYDHPFLQRCN 267
            L   R LWK G+LP G ITFY  T +LDK WHVLGLGY+ GV+  +I  A VIHY+G MKPWL+IA+ +YK  WTK+++ +  F+Q CN
Sbjct:  470 LNEDRTLWKLGTLPPGLITFYSKTKSLDKSWHVLGLGYNPGVSMDEIRNAGVIHYNGNMKPWLDIAMNQYKSLWTKYVDNEMEFVQMCN 558
[Close]
BLAST of CX676533 vs. ExPASy Swiss-Prot
Match: QUA1_ARATH (Glycosyltransferase QUASIMODO1 OS=Arabidopsis thaliana GN=QUA1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.232e-23
Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = 1 
Query:    1 LGYKRPLWKAGSLPLGWITFYKHTVALDKRWHVLGLGYDSGVARRDIEQAAVIHYDGVMKPWLEIAIAKYKGYWTKFINYDHPFLQRCN 267
            L   R LWK G+LP G ITFY  T  LDK WHVLGLGY+  ++  +I  AAV+H++G MKPWL+IA+ +++  WTK ++YD  F+Q CN
Sbjct:  468 LNENRALWKLGTLPPGLITFYSTTKPLDKSWHVLGLGYNPSISMDEIRNAAVVHFNGNMKPWLDIAMNQFRPLWTKHVDYDLEFVQACN 556
The following BLAST results are available for this feature:
BLAST of CX676533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
GLTR_ARATH1.183e-2456.18Uncharacterized glycosyltransferase At3g02350 OS=A... [more]
QUA1_ARATH2.232e-2352.81Glycosyltransferase QUASIMODO1 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_70E05_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70E05-I10-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676533 ID=CX676533; Name=CX676533; organism=Citrus sinensis; type=EST; length=570bp
TTGGGATACAAGAGGCCATTGTGGAAGGCTGGGAGCTTGCCTTTAGGTTG
GATAACTTTTTATAAACATACAGTGGCTCTAGACAAGAGATGGCATGTAC
TTGGTCTAGGTTATGATTCGGGTGTTGCTCGACGGGACATTGAGCAAGCA
GCAGTGATACACTATGATGGAGTCATGAAACCATGGTTGGAGATTGCAAT
TGCTAAATACAAGGGATACTGGACCAAATTTATAAATTATGACCATCCTT
TTCTGCAGCGGTGCAATCTCCACGTATAATGCAACATGACAACTAGTATT
ACCGGTATTAAGTGATCCACACCACATTATTGGAGTTGCTCATTTACTTG
ATTCTTTATTGATCTCATGTAAATTTCTAGTCAGTCGAAAATTTTTCCGG
CAGTAATCTCTTAGGAGTTGAGTTGATTTATAGCGATAATGTGAGAAGGG
TCCGTGCTGGTAGATGTTTGTACATAACCCATTTCACGTATTCCATTATA
CTAAAACTGTACTGAAAAAGAAGATTTTTATTCATTTACATCAATTTTAA
TANNAAAAAAAAAAAAAAAA
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