CX676527

Overview
NameCX676527
Unique NameCX676527
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 46/110 (41.82%), Postives = 68/110 (61.82%), Query Frame = 3
Query:  372 SSSEPSRQPCKCYRVRSLAETILDTNQI-----SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYED 686
            S  +P  +P K   ++ ++   L T  +      N +E + LG++LG GQFG   +C +K TG+ FACKSIAK +L+T +D   V+ EI+IM  L+GHPNV+ +K  YED
Sbjct:  111 SKPDPPAKPKKPKHMKRVSSAGLRTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCVEKTTGKEFACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYED 220          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17
Identity = 45/112 (40.18%), Postives = 67/112 (59.82%), Query Frame = 3
Query:  366 SNSSSEPSRQPCKCYRVRSLAETILDTNQI-----SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYED 686
            S +  E   +P K   +R ++   L T  +      N +E + LG++LG GQFG   +C +K TG  +ACKSI+K +L+T +D   V+ EI+IM  L+GHPNV+ +K  YED
Sbjct:  145 SETKPETKAEPQKPKHMRRVSSAGLRTESVLQRKTENFKEFYSLGRKLGQGQFGTTFLCLEKGTGNEYACKSISKRKLLTDEDVEDVRREIQIMHHLAGHPNVISIKGAYED 256          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPKV_ARATH (Calcium-dependent protein kinase 31 OS=Arabidopsis thaliana GN=CPK31 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.334e-16
Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 3
Query:  405 CYRVRSLAE---TILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            CY  ++L +   TIL+   + ++ + ++LG +LG GQFG+ R C +K +G+ +ACK+I K  L + +DE +VK EI IM  LSG PN+V+ K  YED D V
Sbjct:    3 CYSSKNLKQSKRTILEKPFV-DIGKVYILGDELGQGQFGITRKCVEKTSGKTYACKTILKTNLKSREDEEAVKREIRIMKHLSGEPNIVEFKKAYEDRDSV 102          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = 3
Query:  384 PSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            PS +P + +R  S   TIL      ++R ++ LG++LG GQFG +  C++  +G+++ACKSI K +LV+ +D+  +K EI+I+  LSG PN+V+ K V+ED   V
Sbjct:   54 PSLKPRQVHRPES--NTILG-KPFEDIRGKYTLGKELGRGQFGCVYQCTENSSGQLYACKSILKRKLVSKNDKEDIKREIQILQHLSGQPNIVEFKGVFEDRQSV 155          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPKX_ARATH (Calcium-dependent protein kinase 33 OS=Arabidopsis thaliana GN=CPK33 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.972e-16
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 3
Query:  357 VGQSNSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            +    +   P R P K     S A  IL+     +++  + L ++LG GQFGV  +C++K TG+ FACKSI+K +LVT  D+  ++ EI+IM  LSG PN+V+ K  YEDE  V
Sbjct:   39 ISTGTNQPPPWRNPAK----HSGAAAILE-KPYEDVKLFYTLSKELGRGQFGVTYLCTEKSTGKRFACKSISKKKLVTKGDKEDMRREIQIMQHLSGQPNIVEFKGAYEDEKAV 147          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPKK_ARATH (Calcium-dependent protein kinase 20 OS=Arabidopsis thaliana GN=CPK20 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16
Identity = 44/110 (40.00%), Postives = 67/110 (60.91%), Query Frame = 3
Query:  363 QSNSSSEPSRQPCKCYRVRSLAETILDT--NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYED 686
            + + +S+P ++     R+ S    I      +  NL++ + +G++LG GQFG   +C DK TG+ FACK+IAK +L T +D   V+ EI+IM  LSGHPNV+ +   YED
Sbjct:   95 KEDPNSKPQKKEAHMKRMASAGLQIDSVLGRKTENLKDIYSVGRKLGQGQFGTTFLCVDKKTGKEFACKTIAKRKLTTPEDVEDVRREIQIMHHLSGHPNVIQIVGAYED 204          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 47/117 (40.17%), Postives = 71/117 (60.68%), Query Frame = 3
Query:  360 GQSNSSSEPSRQ----PCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            G  NS   P R     P    +  + + +IL+ N   +++  + LG++LG GQFGV  +C++  TG+ +ACKSI+K +LVT  D+  ++ EI+IM  LSG PN+V+ K  YEDE  V
Sbjct:   50 GSVNSQPPPWRAAAAAPGLSPKTTTKSNSILE-NAFEDVKLFYTLGKELGRGQFGVTYLCTENSTGKKYACKSISKKKLVTKADKDDMRREIQIMQHLSGQPNIVEFKGAYEDEKAV 165          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 50/133 (37.59%), Postives = 75/133 (56.39%), Query Frame = 3
Query:  351 AAVGQSNSSSEPSRQPCKCYR-----------------VRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            A V   +  S+PS +P K  R                 +R L + I  +NQ + + ++++LG++LG G+FG+  +C+D+ T E  ACKSI+K +L T  D   V+ E+ IM+ L  HPNVV LKA YED + V
Sbjct:    6 ACVRPDSKESKPSSKPKKPNRDRKLNPFAGDFTRSPAPIRVLKDVIPMSNQ-TQISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKRKLRTAVDIEDVRREVAIMSTLPEHPNVVKLKASYEDNENV 137          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPK4_SOLTU (Calcium-dependent protein kinase 4 OS=Solanum tuberosum GN=CPK4 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16
Identity = 38/80 (47.50%), Postives = 56/80 (70.00%), Query Frame = 3
Query:  459 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            N+R+ + LG++LG GQFG   +C++  TG  +ACKSI+K +L++ +D   V+ EI+IM  LSGH N+V +K  YED  YV
Sbjct:   89 NIRDLYTLGRKLGQGQFGTTYLCTENSTGAEYACKSISKRKLISKEDVEDVRREIQIMHHLSGHRNIVTIKGAYEDPLYV 168          
BLAST of CX676527 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 43/94 (45.74%), Postives = 58/94 (61.70%), Query Frame = 3
Query:  417 RSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYV 698
            R L   +L+      +  ++ LG++LG G+FGV  +C+DK T +VFACKSI K +L T  D   V+ E+EIM  +  HPNVV LK  YEDE  V
Sbjct:   44 RPLKLIVLNDPTGREIESKYTLGRELGRGEFGVTYLCTDKETDDVFACKSILKKKLRTAVDIEDVRREVEIMRHMPEHPNVVTLKETYEDEHAV 137          
The following BLAST results are available for this feature:
BLAST of CX676527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
CDPK1_ARATH1.207e-1741.82Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPK2_ARATH7.822e-1740.18Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
CDPKV_ARATH1.334e-1643.56Calcium-dependent protein kinase 31 OS=Arabidopsis... [more]
CDPK_DAUCA2.276e-1640.95Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPKX_ARATH2.972e-1641.23Calcium-dependent protein kinase 33 OS=Arabidopsis... [more]
CDPKK_ARATH3.882e-1640.00Calcium-dependent protein kinase 20 OS=Arabidopsis... [more]
CDPK9_ARATH5.070e-1640.17Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CDPKA_ARATH6.621e-1637.59Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPK4_SOLTU8.648e-1647.50Calcium-dependent protein kinase 4 OS=Solanum tube... [more]
CDPKW_ARATH1.129e-1545.74Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_70D12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-70D12-G24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX676527 ID=CX676527; Name=CX676527; organism=Citrus sinensis; type=EST; length=699bp
AGGACAGGAGAATCATGTCTTGGGGGGCTTAATCACTGCTCCAACGGGAC
TCTCTTCTCTGTGGCTCCCTCTCTCATTCTCTCTGTCTCCCTCTAGCCGA
TCCGGTTGATCTGTTGAGAACTGAGGGAATACTCTGCCAAGAGAGTTAAG
TTTTGGTTGTTTCAGTATTCTAGGTTACTTTCCTGGCTTCTTCACGGTTT
TGCTGTTAACAATTACCCATTAATTTCCTGGCTGTTTCACGGTATTTCTG
TTGCTAACAATCAGCCACGTGGAAGTTCCATTGAATTATTAATTGAGTAA
GTGAGTTCAGGGGTATTTTTGGCTGGTCTGGGGAGCTAGAATTTGGTATG
GCGGCTGTTGGTCAGAGTAACAGCAGCAGCGAACCATCAAGACAACCTTG
TAAGTGTTACAGAGTGAGGAGCTTGGCTGAAACAATTTTGGACACGAACC
AGATCTCCAATTTGAGAGAACGATTTGTTCTTGGGCAGCAGTTGGGTTGG
GGGCAGTTTGGTGTTATAAGGGTGTGTTCTGATAAATTTACTGGAGAGGT
GTTCGCTTGTAAATCGATTGCCAAAGATAGATTGGTGACTATAGATGATG
AACGAAGTGTGAAGCTTGAGATTGAAATAATGACTAGGTTATCAGGCCAC
CCAAATGTTGTAGATCTCAAAGCGGTTTATGAGGATGAAGACTATGTAC
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